YAP5 (YIR018W)


Gene profile

Gene name: YAP5
Reference locus (S288C): YIR018W
Gene biotype: protein_coding

Description: Basic leucine zipper (bZIP) iron-sensing transcription factor; involved in diauxic shift; YAP5 has a paralog, YAP7, that arose from the whole genome duplication

Top 10 interactors (score): CCC1 (0.938); AFT1 (0.907); GAT3 (0.871); AFT2 (0.815); YAP6 (0.813); TYW1 (0.81); HAP5 (0.783); SEF1 (0.773); TIS11 (0.76); CIN5 (0.748); FET5 (0.748); FHL1 (0.745); PDR1 (0.744); HAP2 (0.723); MSN4 (0.718); GRX4 (0.716); MET28 (0.71); MSN2 (0.701); FTH1 (0.696); SMF3 (0.696)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005303.1:383954-384691:+ gene-YIR018W_AKU4011 rna-NM_001179540.1_AKU4011 cds-NP_012283.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000072.1:41881-42618:- gene-YIR018W_BG1 rna-NM_001179540.1_BG1 cds-NP_012283.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:388271-389008:+ gene-YIR018W_Bruggeman rna-NM_001179540.1_Bruggeman cds-NP_012283.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005527.1:374987-375724:+ gene-YIR018W_CAT1 rna-NM_001179540.1_CAT1 cds-NP_012283.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005367.1:383981-384718:+ gene-YIR018W_CBS1585 rna-NM_001179540.1_CBS1585 cds-NP_012283.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005351.1:376551-377288:+ gene-YIR018W_CBS436 rna-NM_001179540.1_CBS436 cds-NP_012283.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005335.1:379472-380209:+ gene-YIR018W_CBS6412 rna-NM_001179540.1_CBS6412 cds-NP_012283.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005319.1:376062-376799:+ gene-YIR018W_CBS6413 rna-NM_001179540.1_CBS6413 cds-NP_012283.1_CBS6413 99.7 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001530.1:376664-377401:+ gene-YIR018W_CENPK1137D rna-NM_001179540.1_CENPK1137D cds-NP_012283.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005479.1:367036-367773:+ gene-YIR018W_EthanolRed rna-NM_001179540.1_EthanolRed cds-NP_012283.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005543.1:385762-386499:+ gene-YIR018W_FaliES1 rna-NM_001179540.1_FaliES1 cds-NP_012283.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000009.1:5566-6303:- gene-YIR018W_JAY291 rna-NM_001179540.1_JAY291 cds-NP_012283.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005415.1:385764-386501:+ gene-YIR018W_MUCL30387 rna-NM_001179540.1_MUCL30387 cds-NP_012283.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005447.1:382544-383281:+ gene-YIR018W_MUCL30388 rna-NM_001179540.1_MUCL30388 cds-NP_012283.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005287.1:384623-385360:+ gene-YIR018W_MUCL39482 rna-NM_001179540.1_MUCL39482 cds-NP_012283.1_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005431.1:388185-388922:+ gene-YIR018W_MUCL42920 rna-NM_001179540.1_MUCL42920 cds-NP_012283.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011818.1:384609-385346:+ gene-YIR018W_NCIM3186 rna-NM_001179540.1_NCIM3186 cds-NP_012283.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005271.1:388845-389582:+ gene-YIR018W_NCYC1407 rna-NM_001179540.1_NCYC1407 cds-NP_012283.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994148.1:378569-379306:+ gene-YIR018W_PE2H3 rna-NM_001179540.1_PE2H3 cds-NP_012283.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999880.1:373275-374012:+ gene-YIR018W_PE2H4 rna-NM_001179540.1_PE2H4 cds-NP_012283.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001141.2:384609-385346:+ gene-YIR018W_S288C rna-NM_001179540.1_S288C cds-NP_012283.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000066.1:59465-60202:+ gene-YIR018W_SA1 rna-NM_001179540.1_SA1 cds-NP_012283.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005495.1:383367-384104:+ gene-YIR018W_ThermosaccDry rna-NM_001179540.1_ThermosaccDry cds-NP_012283.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005463.1:379450-380187:+ gene-YIR018W_VR1 rna-NM_001179540.1_VR1 cds-NP_012283.1_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000019.1:357366-358103:+ gene-YIR018W_ZTW1 rna-NM_001179540.1_ZTW1 cds-NP_012283.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047495.1:378710-379447:+ gene-YIR018W_Sparadoxus rna-NM_001179540.1_Sparadoxus cds-NP_012283.1_Sparadoxus 88.3 99.8 Verified 1 1 1 False True False False False

Additional files