Gene name: YAP1801
Reference locus (S288C): YHR161C
Gene biotype: protein_coding
Description: Protein of the AP180 family, involved in clathrin cage assembly; binds Pan1p and clathrin; YAP1801 has a paralog, YAP1802, that arose from the whole genome duplication
Top 10 interactors (score): EDE1 (0.995); PAN1 (0.993); ENT1 (0.99); SLA2 (0.99); CHC1 (0.987); APL3 (0.986); ENT2 (0.981); END3 (0.979); CLC1 (0.972); APM4 (0.969); PRK1 (0.956); INP52 (0.954); RVS161 (0.952); SNC1 (0.951); INP51 (0.937); RVS167 (0.932); VPS1 (0.924); BZZ1 (0.908); APS2 (0.901); ARP2 (0.899)
Homologues (species, bitscore): PICALM (Homo sapiens, 109.8); Snap91 (Mus musculus, 110.5); picalma (Danio rerio, 114.4); picalm.2 (Xenopus tropicalis, 105.9); lap (Drosophila melanogaster, 131.3); unc-11 (Caenorhabditis elegans, 114.0); AT1G14910 (Arabidopsis thaliana, 95.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:407473-409371:- | gene-YHR161C_AKU4011 | rna-NM_001179292.1_AKU4011 | cds-NP_012031.1_AKU4011 | 98.5 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:108359-110257:+ | gene-YHR161C_BG1 | rna-NM_001179292.1_BG1 | cds-NP_012031.1_BG1 | 99.2 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:414714-416612:- | gene-YHR161C_Bruggeman | rna-NM_001179292.1_Bruggeman | cds-NP_012031.1_Bruggeman | 98.5 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:410127-412025:- | gene-YHR161C_CAT1 | rna-NM_001179292.1_CAT1 | cds-NP_012031.1_CAT1 | 99.2 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:406930-408828:- | gene-YHR161C_CBS1585 | rna-NM_001179292.1_CBS1585 | cds-NP_012031.1_CBS1585 | 98.5 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:404383-406281:- | gene-YHR161C_CBS436 | rna-NM_001179292.1_CBS436 | cds-NP_012031.1_CBS436 | 99.2 | 99.2 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:407383-409281:- | gene-YHR161C_CBS6412 | rna-NM_001179292.1_CBS6412 | cds-NP_012031.1_CBS6412 | 98.5 | 99.2 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:407810-409708:- | gene-YHR161C_CBS6413 | rna-NM_001179292.1_CBS6413 | cds-NP_012031.1_CBS6413 | 98.3 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:413545-415458:- | gene-YHR161C_CENPK1137D | rna-NM_001179292.1_CENPK1137D | cds-NP_012031.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:466024-467922:- | gene-YHR161C_EthanolRed | rna-NM_001179292.1_EthanolRed | cds-NP_012031.1_EthanolRed | 98.4 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:408467-410365:- | gene-YHR161C_FaliES1 | rna-NM_001179292.1_FaliES1 | cds-NP_012031.1_FaliES1 | 98.4 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000017.1:29468-31374:+ | gene-YHR161C_JAY291 | rna-NM_001179292.1_JAY291 | cds-NP_012031.1_JAY291 | 99.2 | 99.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:415793-417691:- | gene-YHR161C_MUCL30387 | rna-NM_001179292.1_MUCL30387 | cds-NP_012031.1_MUCL30387 | 98.5 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:415236-417134:- | gene-YHR161C_MUCL30388 | rna-NM_001179292.1_MUCL30388 | cds-NP_012031.1_MUCL30388 | 98.5 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:406841-408739:- | gene-YHR161C_MUCL39482 | rna-NM_001179292.1_MUCL39482 | cds-NP_012031.1_MUCL39482 | 98.5 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:413450-415348:- | gene-YHR161C_MUCL42920 | rna-NM_001179292.1_MUCL42920 | cds-NP_012031.1_MUCL42920 | 98.6 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:420255-422168:- | gene-YHR161C_NCIM3186 | rna-NM_001179292.1_NCIM3186 | cds-NP_012031.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:409299-411197:- | gene-YHR161C_NCYC1407 | rna-NM_001179292.1_NCYC1407 | cds-NP_012031.1_NCYC1407 | 98.3 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:408443-410350:- | gene-YHR161C_PE2H3 | rna-NM_001179292.1_PE2H3 | cds-NP_012031.1_PE2H3 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:415870-417777:- | gene-YHR161C_PE2H4 | rna-NM_001179292.1_PE2H4 | cds-NP_012031.1_PE2H4 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:420373-422286:- | gene-YHR161C_S288C | rna-NM_001179292.1_S288C | cds-NP_012031.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000070.1:29530-31428:+ | gene-YHR161C_SA1 | rna-NM_001179292.1_SA1 | cds-NP_012031.1_SA1 | 99.2 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:409550-411448:- | gene-YHR161C_ThermosaccDry | rna-NM_001179292.1_ThermosaccDry | cds-NP_012031.1_ThermosaccDry | 98.4 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:417365-419272:- | gene-YHR161C_VR1 | rna-NM_001179292.1_VR1 | cds-NP_012031.1_VR1 | 99.6 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:399790-401688:- | gene-YHR161C_ZTW1 | rna-NM_001179292.1_ZTW1 | cds-NP_012031.1_ZTW1 | 98.4 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:405938-407815:- | gene-YHR161C_Sparadoxus | rna-NM_001179292.1_Sparadoxus | cds-NP_012031.1_Sparadoxus | 84.3 | 97.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |