YAL067W-A (YAL067W-A)

Gene profile

Gene name: YAL067W-A
Reference locus (S288C): YAL067W-A
Gene biotype: protein_coding

Description: Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; Belongs to the UPF0377 family

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005295.1:1293-1520:+ gene-YAL067W-A_AKU4011 rna-NM_001184582.1_AKU4011 cds-NP_878038.1_AKU4011 96.9 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000009.1:1455-1681:- gene-YAL067W-A_BG1 rna-NM_001184582.1_BG1 cds-NP_878038.1_BG1 94.2 99.5 Verified 1 1 0 False False True False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:12128-12389:+ gene-YAL067W-A_Bruggeman rna-NM_001184582.1_Bruggeman cds-NP_878038.1_Bruggeman 84.7 99.5 Unannotated 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:1036102-1036329:- gene-YAL067W-A_CAT1 rna-NM_001184582.1_CAT1 cds-NP_878038.1_CAT1 96.0 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005359.1:1713-1940:+ gene-YAL067W-A_CBS1585 rna-NM_001184582.1_CBS1585 cds-NP_878038.1_CBS1585 96.9 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:309565-309794:- gene-YAL067W-A_CBS436 rna-NM_001184582.1_CBS436 cds-NP_878038.1_CBS436 93.9 100.0 Unannotated 1 1 0 False False False True False
CBS6412 GCA_001738345.1 Sake Asia CM005327.1:409-636:+ gene-YAL067W-A_CBS6412 rna-NM_001184582.1_CBS6412 cds-NP_878038.1_CBS6412 96.0 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005311.1:273-500:+ gene-YAL067W-A_CBS6413 rna-NM_001184582.1_CBS6413 cds-NP_878038.1_CBS6413 96.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:2339-2565:+ gene-YAL067W-A_CENPK1137D rna-NM_001184582.1_CENPK1137D cds-NP_878038.1_CENPK1137D 95.6 99.5 Verified 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005471.1:2578-2805:+ gene-YAL067W-A_EthanolRed rna-NM_001184582.1_EthanolRed cds-NP_878038.1_EthanolRed 96.0 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005535.1:2831-3058:+ gene-YAL067W-A_FaliES1 rna-NM_001184582.1_FaliES1 cds-NP_878038.1_FaliES1 96.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000073.1:1-219:+ gene-YAL067W-A_JAY291 rna-NM_001184582.1_JAY291 cds-NP_878038.1_JAY291 72.7 89.9 Unannotated 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:297091-297317:- gene-YAL067W-A_MUCL30387 rna-NM_001184582.1_MUCL30387 cds-NP_878038.1_MUCL30387 98.2 99.5 Verified 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005447.1:7873-8100:+ gene-YAL067W-A_MUCL30388 rna-NM_001184582.1_MUCL30388 cds-NP_878038.1_MUCL30388 96.0 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005279.1:513-740:+ gene-YAL067W-A_MUCL39482 rna-NM_001184582.1_MUCL39482 cds-NP_878038.1_MUCL39482 96.9 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005431.1:10849-11076:+ gene-YAL067W-A_MUCL42920 rna-NM_001184582.1_MUCL42920 cds-NP_878038.1_MUCL42920 96.0 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011810.1:2357-2584:+ gene-YAL067W-A_NCIM3186 rna-NM_001184582.1_NCIM3186 cds-NP_878038.1_NCIM3186 95.6 100.0 Verified 1 1 0 False False True False False
NCYC1407 GCA_001738225.1 Sake Asia CM005263.1:836-1063:+ gene-YAL067W-A_NCYC1407 rna-NM_001184582.1_NCYC1407 cds-NP_878038.1_NCYC1407 96.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994148.1:427415-427641:- gene-YAL067W-A_PE2H3 rna-NM_001184582.1_PE2H3 cds-NP_878038.1_PE2H3 95.6 99.5 Verified 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999880.1:422121-422347:- gene-YAL067W-A_PE2H4 rna-NM_001184582.1_PE2H4 cds-NP_878038.1_PE2H4 95.6 99.5 Verified 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001133.9:2480-2707:+ gene-YAL067W-A_S288C rna-NM_001184582.1_S288C cds-NP_878038.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000160.1:1425-1654:- gene-YAL067W-A_SA1 rna-NM_001184582.1_SA1 cds-NP_878038.1_SA1 93.9 100.0 Unannotated 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005487.1:2455-2682:+ gene-YAL067W-A_ThermosaccDry rna-NM_001184582.1_ThermosaccDry cds-NP_878038.1_ThermosaccDry 96.0 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:319317-319543:- gene-YAL067W-A_VR1 rna-NM_001184582.1_VR1 cds-NP_878038.1_VR1 94.7 99.5 Verified 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000001.1:8089-8316:+ gene-YAL067W-A_ZTW1 rna-NM_001184582.1_ZTW1 cds-NP_878038.1_ZTW1 96.9 100.0 Mismatch 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:770514-770757:- gene-YAL067W-A_Sparadoxus rna-NM_001184582.1_Sparadoxus cds-NP_878038.1_Sparadoxus 79.9 100.0 Mismatch 1 1 0 False False False True False

Additional files