Gene name: YAF9
Reference locus (S288C): YNL107W
Gene biotype: protein_coding
Description: Protein AF-9 homolog; Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes; may function to antagonize silencing near telomeres; interacts directly with Swc4p; has homology to human leukemogenic protein AF9; contains a YEATS domain
Top 10 interactors (score): EPL1 (0.999); EAF3 (0.999); TRA1 (0.999); SWC4 (0.999); VPS72 (0.999); SWC5 (0.999); ESA1 (0.999); RVB1 (0.999); EAF6 (0.998); BDF1 (0.998); YNG2 (0.998); SWR1 (0.998); ARP4 (0.997); EAF5 (0.997); RVB2 (0.997); VPS71 (0.997); HTZ1 (0.997); EAF7 (0.997); EAF1 (0.996); ACT1 (0.996)
Homologues (species, bitscore): YEATS4 (Homo sapiens, 135.2); Yeats4 (Mus musculus, 135.2); yeats4 (Danio rerio, 130.2); yeats4 (Xenopus tropicalis, 136.0); Gas41 (Drosophila melanogaster, 128.3); gfl-1 (Caenorhabditis elegans, 127.9); GAS41 (Arabidopsis thaliana, 124.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:413740-414420:+ | gene-YNL107W_AKU4011 | rna-NM_001182945.3_AKU4011 | cds-NP_014292.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:317750-318430:+ | gene-YNL107W_BG1 | rna-NM_001182945.3_BG1 | cds-NP_014292.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:424473-425153:+ | gene-YNL107W_Bruggeman | rna-NM_001182945.3_Bruggeman | cds-NP_014292.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:467516-468196:+ | gene-YNL107W_CAT1 | rna-NM_001182945.3_CAT1 | cds-NP_014292.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:414355-415035:+ | gene-YNL107W_CBS1585 | rna-NM_001182945.3_CBS1585 | cds-NP_014292.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:482781-483461:+ | gene-YNL107W_CBS436 | rna-NM_001182945.3_CBS436 | cds-NP_014292.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:409828-410508:+ | gene-YNL107W_CBS6412 | rna-NM_001182945.3_CBS6412 | cds-NP_014292.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:410831-411511:+ | gene-YNL107W_CBS6413 | rna-NM_001182945.3_CBS6413 | cds-NP_014292.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:413949-414629:+ | gene-YNL107W_CENPK1137D | rna-NM_001182945.3_CENPK1137D | cds-NP_014292.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:410759-411439:+ | gene-YNL107W_EthanolRed | rna-NM_001182945.3_EthanolRed | cds-NP_014292.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:406655-407335:+ | gene-YNL107W_FaliES1 | rna-NM_001182945.3_FaliES1 | cds-NP_014292.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000021.1:63037-63717:+ | gene-YNL107W_JAY291 | rna-NM_001182945.3_JAY291 | cds-NP_014292.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:420643-421323:+ | gene-YNL107W_MUCL30387 | rna-NM_001182945.3_MUCL30387 | cds-NP_014292.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:456033-456713:+ | gene-YNL107W_MUCL30388 | rna-NM_001182945.3_MUCL30388 | cds-NP_014292.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:411748-412428:+ | gene-YNL107W_MUCL39482 | rna-NM_001182945.3_MUCL39482 | cds-NP_014292.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:415783-416463:+ | gene-YNL107W_MUCL42920 | rna-NM_001182945.3_MUCL42920 | cds-NP_014292.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:420067-420747:+ | gene-YNL107W_NCIM3186 | rna-NM_001182945.3_NCIM3186 | cds-NP_014292.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:413885-414565:+ | gene-YNL107W_NCYC1407 | rna-NM_001182945.3_NCYC1407 | cds-NP_014292.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:412808-413488:+ | gene-YNL107W_PE2H3 | rna-NM_001182945.3_PE2H3 | cds-NP_014292.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:412214-412894:+ | gene-YNL107W_PE2H4 | rna-NM_001182945.3_PE2H4 | cds-NP_014292.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:420098-420778:+ | gene-YNL107W_S288C | rna-NM_001182945.3_S288C | cds-NP_014292.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:5058-5738:+ | gene-YNL107W_SA1 | rna-NM_001182945.3_SA1 | cds-NP_014292.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:407527-408207:+ | gene-YNL107W_ThermosaccDry | rna-NM_001182945.3_ThermosaccDry | cds-NP_014292.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:426232-426912:+ | gene-YNL107W_VR1 | rna-NM_001182945.3_VR1 | cds-NP_014292.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:317346-318026:+ | gene-YNL107W_ZTW1 | rna-NM_001182945.3_ZTW1 | cds-NP_014292.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:418432-419112:+ | gene-YNL107W_Sparadoxus | rna-NM_001182945.3_Sparadoxus | cds-NP_014292.3_Sparadoxus | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |