Gene name: XYL2
Reference locus (S288C): YLR070C
Gene biotype: protein_coding
Description: D-xylulose reductase; Xylitol dehydrogenase; converts xylitol to D-xylulose; expression induced by xylose, even though this pentose sugar is not well utilized by S. cerevisiae; null mutant has cell wall defect
Top 10 interactors (score): GRE3 (0.998); XKS1 (0.998); TAL1 (0.971); PHO13 (0.929); TKL1 (0.915); RPE1 (0.887); PGK1 (0.885); RKI1 (0.868); TKL2 (0.829); NQM1 (0.826); ZWF1 (0.82); GND2 (0.756); GND1 (0.75); HXT7 (0.748); ALD6 (0.74); TDH3 (0.723); GAL2 (0.695); YPR1 (0.693); HXK2 (0.684); TPI1 (0.671)
Homologues (species, bitscore): SORD (Homo sapiens, 290.4); Sord (Mus musculus, 301.2); LOC570613 (Danio rerio, 278.5); sord (Xenopus tropicalis, 297.7); Sodh-1 (Drosophila melanogaster, 299.3); R04B5.5 (Caenorhabditis elegans, 289.3); AT5G51970 (Arabidopsis thaliana, 244.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:256615-257685:- | gene-YLR070C_AKU4011 | rna-NM_001181957.1_AKU4011 | cds-NP_013171.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:219750-220820:- | gene-YLR070C_BG1 | rna-NM_001181957.1_BG1 | cds-NP_013171.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:266522-267592:- | gene-YLR070C_Bruggeman | rna-NM_001181957.1_Bruggeman | cds-NP_013171.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:266835-267905:- | gene-YLR070C_CAT1 | rna-NM_001181957.1_CAT1 | cds-NP_013171.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:263729-264799:- | gene-YLR070C_CBS1585 | rna-NM_001181957.1_CBS1585 | cds-NP_013171.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:254347-255417:- | gene-YLR070C_CBS436 | rna-NM_001181957.1_CBS436 | cds-NP_013171.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:262167-263237:- | gene-YLR070C_CBS6412 | rna-NM_001181957.1_CBS6412 | cds-NP_013171.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:264000-265070:- | gene-YLR070C_CBS6413 | rna-NM_001181957.1_CBS6413 | cds-NP_013171.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:259163-260233:- | gene-YLR070C_CENPK1137D | rna-NM_001181957.1_CENPK1137D | cds-NP_013171.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:256134-257204:- | gene-YLR070C_EthanolRed | rna-NM_001181957.1_EthanolRed | cds-NP_013171.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:256010-257080:- | gene-YLR070C_FaliES1 | rna-NM_001181957.1_FaliES1 | cds-NP_013171.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000129.1:30941-32011:- | gene-YLR070C_JAY291 | rna-NM_001181957.1_JAY291 | cds-NP_013171.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:263887-264957:- | gene-YLR070C_MUCL30387 | rna-NM_001181957.1_MUCL30387 | cds-NP_013171.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:271534-272604:- | gene-YLR070C_MUCL30388 | rna-NM_001181957.1_MUCL30388 | cds-NP_013171.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:264242-265312:- | gene-YLR070C_MUCL39482 | rna-NM_001181957.1_MUCL39482 | cds-NP_013171.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:264161-265231:- | gene-YLR070C_MUCL42920 | rna-NM_001181957.1_MUCL42920 | cds-NP_013171.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:274115-275185:- | gene-YLR070C_NCIM3186 | rna-NM_001181957.1_NCIM3186 | cds-NP_013171.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:256315-257385:- | gene-YLR070C_NCYC1407 | rna-NM_001181957.1_NCYC1407 | cds-NP_013171.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:262178-263248:- | gene-YLR070C_PE2H3 | rna-NM_001181957.1_PE2H3 | cds-NP_013171.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:261919-262989:- | gene-YLR070C_PE2H4 | rna-NM_001181957.1_PE2H4 | cds-NP_013171.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:274141-275211:- | gene-YLR070C_S288C | rna-NM_001181957.1_S288C | cds-NP_013171.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000033.1:98981-100051:+ | gene-YLR070C_SA1 | rna-NM_001181957.1_SA1 | cds-NP_013171.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:256186-257256:- | gene-YLR070C_ThermosaccDry | rna-NM_001181957.1_ThermosaccDry | cds-NP_013171.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:269871-270941:- | gene-YLR070C_VR1 | rna-NM_001181957.1_VR1 | cds-NP_013171.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:255573-256643:- | gene-YLR070C_ZTW1 | rna-NM_001181957.1_ZTW1 | cds-NP_013171.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:264460-265530:- | gene-YLR070C_Sparadoxus | rna-NM_001181957.1_Sparadoxus | cds-NP_013171.1_Sparadoxus | 86.9 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |