Gene name: XRS2
Reference locus (S288C): YDR369C
Gene biotype: protein_coding
Description: Dna repair protein xrs2; Protein required for DNA repair; component of the Mre11 complex, which is involved in double strand breaks, meiotic recombination, telomere maintenance, and checkpoint signaling
Top 10 interactors (score): MRE11 (0.999); RAD50 (0.992); SAE2 (0.957); TEL1 (0.937); SPO11 (0.918); SRS2 (0.808); LIF1 (0.788); ELG1 (0.776); RAD17 (0.773); MEC1 (0.772); RAD27 (0.759); EXO1 (0.731); IRC21 (0.712); YKL075C (0.699); HRQ1 (0.691); TDA5 (0.69); RTT107 (0.686); CLB2 (0.666); DMC1 (0.655); PCH2 (0.619)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1155159-1157723:- | gene-YDR369C_AKU4011 | rna-NM_001180677.3_AKU4011 | cds-NP_010657.3_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:33708-36272:- | gene-YDR369C_BG1 | rna-NM_001180677.3_BG1 | cds-NP_010657.3_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1185809-1188373:- | gene-YDR369C_Bruggeman | rna-NM_001180677.3_Bruggeman | cds-NP_010657.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1164402-1166966:- | gene-YDR369C_CAT1 | rna-NM_001180677.3_CAT1 | cds-NP_010657.3_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1149876-1152440:- | gene-YDR369C_CBS1585 | rna-NM_001180677.3_CBS1585 | cds-NP_010657.3_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1168459-1171023:- | gene-YDR369C_CBS436 | rna-NM_001180677.3_CBS436 | cds-NP_010657.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1146136-1148700:- | gene-YDR369C_CBS6412 | rna-NM_001180677.3_CBS6412 | cds-NP_010657.3_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1168026-1170590:- | gene-YDR369C_CBS6413 | rna-NM_001180677.3_CBS6413 | cds-NP_010657.3_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1213668-1216232:- | gene-YDR369C_CENPK1137D | rna-NM_001180677.3_CENPK1137D | cds-NP_010657.3_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1159560-1162124:- | gene-YDR369C_EthanolRed | rna-NM_001180677.3_EthanolRed | cds-NP_010657.3_EthanolRed | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1162843-1165407:- | gene-YDR369C_FaliES1 | rna-NM_001180677.3_FaliES1 | cds-NP_010657.3_FaliES1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000057.1:25662-28226:+ | gene-YDR369C_JAY291 | rna-NM_001180677.3_JAY291 | cds-NP_010657.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1169109-1171673:- | gene-YDR369C_MUCL30387 | rna-NM_001180677.3_MUCL30387 | cds-NP_010657.3_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1151713-1154277:- | gene-YDR369C_MUCL30388 | rna-NM_001180677.3_MUCL30388 | cds-NP_010657.3_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1141410-1143974:- | gene-YDR369C_MUCL39482 | rna-NM_001180677.3_MUCL39482 | cds-NP_010657.3_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1083841-1086405:- | gene-YDR369C_MUCL42920 | rna-NM_001180677.3_MUCL42920 | cds-NP_010657.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1214939-1217503:- | gene-YDR369C_NCIM3186 | rna-NM_001180677.3_NCIM3186 | cds-NP_010657.3_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1155081-1157645:- | gene-YDR369C_NCYC1407 | rna-NM_001180677.3_NCYC1407 | cds-NP_010657.3_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1165514-1168078:- | gene-YDR369C_PE2H3 | rna-NM_001180677.3_PE2H3 | cds-NP_010657.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1171099-1173663:- | gene-YDR369C_PE2H4 | rna-NM_001180677.3_PE2H4 | cds-NP_010657.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1215016-1217580:- | gene-YDR369C_S288C | rna-NM_001180677.3_S288C | cds-NP_010657.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000072.1:33789-36353:- | gene-YDR369C_SA1 | rna-NM_001180677.3_SA1 | cds-NP_010657.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1167124-1169688:- | gene-YDR369C_ThermosaccDry | rna-NM_001180677.3_ThermosaccDry | cds-NP_010657.3_ThermosaccDry | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:594478-597042:- | gene-YDR369C_VR1 | rna-NM_001180677.3_VR1 | cds-NP_010657.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:209958-212522:- | gene-YDR369C_ZTW1 | rna-NM_001180677.3_ZTW1 | cds-NP_010657.3_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1161610-1164183:- | gene-YDR369C_Sparadoxus | rna-NM_001180677.3_Sparadoxus | cds-NP_010657.3_Sparadoxus | 81.8 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |