Gene name: WTM2
Reference locus (S288C): YOR229W
Gene biotype: protein_coding
Description: Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; involved in response to replication stress; contains WD repeats; relocalizes to the cytosol in response to hypoxia; WTM2 has a paralog, UME1, that arose from the whole genome duplication
Top 10 interactors (score): RNR4 (0.9); WTM1 (0.803); RSF1 (0.746); KAP122 (0.636); RNR2 (0.585); YOR283W (0.577); NUP60 (0.428); MEC1 (0.42); SAS5 (0.418); KRR1 (0.416)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:759191-760588:+ | gene-YOR229W_AKU4011 | rna-NM_001183648.1_AKU4011 | cds-NP_014872.1_AKU4011 | 99.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:161223-162626:+ | gene-YOR229W_BG1 | rna-NM_001183648.1_BG1 | cds-NP_014872.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:744655-746055:+ | gene-YOR229W_Bruggeman | rna-NM_001183648.1_Bruggeman | cds-NP_014872.1_Bruggeman | 99.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:745301-746704:+ | gene-YOR229W_CAT1 | rna-NM_001183648.1_CAT1 | cds-NP_014872.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:742177-743577:+ | gene-YOR229W_CBS1585 | rna-NM_001183648.1_CBS1585 | cds-NP_014872.1_CBS1585 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:740865-742268:+ | gene-YOR229W_CBS436 | rna-NM_001183648.1_CBS436 | cds-NP_014872.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:739297-740697:+ | gene-YOR229W_CBS6412 | rna-NM_001183648.1_CBS6412 | cds-NP_014872.1_CBS6412 | 99.2 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:747936-749336:+ | gene-YOR229W_CBS6413 | rna-NM_001183648.1_CBS6413 | cds-NP_014872.1_CBS6413 | 99.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:768173-769576:+ | gene-YOR229W_CENPK1137D | rna-NM_001183648.1_CENPK1137D | cds-NP_014872.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:735328-736707:+ | gene-YOR229W_EthanolRed | rna-NM_001183648.1_EthanolRed | cds-NP_014872.1_EthanolRed | 97.8 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:740725-742104:+ | gene-YOR229W_FaliES1 | rna-NM_001183648.1_FaliES1 | cds-NP_014872.1_FaliES1 | 97.8 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:84634-86037:- | gene-YOR229W_JAY291 | rna-NM_001183648.1_JAY291 | cds-NP_014872.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:747992-749374:+ | gene-YOR229W_MUCL30387 | rna-NM_001183648.1_MUCL30387 | cds-NP_014872.1_MUCL30387 | 98.4 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:756039-757442:+ | gene-YOR229W_MUCL30388 | rna-NM_001183648.1_MUCL30388 | cds-NP_014872.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:749507-750907:+ | gene-YOR229W_MUCL39482 | rna-NM_001183648.1_MUCL39482 | cds-NP_014872.1_MUCL39482 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:759089-760492:+ | gene-YOR229W_MUCL42920 | rna-NM_001183648.1_MUCL42920 | cds-NP_014872.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:768298-769701:+ | gene-YOR229W_NCIM3186 | rna-NM_001183648.1_NCIM3186 | cds-NP_014872.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:749609-751006:+ | gene-YOR229W_NCYC1407 | rna-NM_001183648.1_NCYC1407 | cds-NP_014872.1_NCYC1407 | 99.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:748999-750402:+ | gene-YOR229W_PE2H3 | rna-NM_001183648.1_PE2H3 | cds-NP_014872.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:759376-760779:+ | gene-YOR229W_PE2H4 | rna-NM_001183648.1_PE2H4 | cds-NP_014872.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:768409-769812:+ | gene-YOR229W_S288C | rna-NM_001183648.1_S288C | cds-NP_014872.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:178405-179808:+ | gene-YOR229W_SA1 | rna-NM_001183648.1_SA1 | cds-NP_014872.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:739910-741289:+ | gene-YOR229W_ThermosaccDry | rna-NM_001183648.1_ThermosaccDry | cds-NP_014872.1_ThermosaccDry | 97.8 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:803440-804843:+ | gene-YOR229W_VR1 | rna-NM_001183648.1_VR1 | cds-NP_014872.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:472810-474213:+ | gene-YOR229W_ZTW1 | rna-NM_001183648.1_ZTW1 | cds-NP_014872.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:745771-747162:+ | gene-YOR229W_Sparadoxus | rna-NM_001183648.1_Sparadoxus | cds-NP_014872.1_Sparadoxus | 90.1 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |