Gene name: WSC4
Reference locus (S288C): YHL028W
Gene biotype: protein_coding
Description: Cell wall integrity and stress response component 4; Endoplasmic reticulum (ER) membrane protein; involved in the translocation of soluble secretory proteins and insertion of membrane proteins into the ER membrane; may also have a role in the stress response but has only partial functional overlap with WSC1-3
Top 10 interactors (score): RPI1 (0.702); KTR7 (0.699); MID2 (0.626); GYP8 (0.57); MTL1 (0.569); PKC1 (0.55); DAL4 (0.53); SLG1 (0.53); DAL5 (0.526); USB1 (0.483); SDS22 (0.453); ILV3 (0.452); TSR1 (0.451); MET13 (0.451); SPO75 (0.45); FUN19 (0.45); RKR1 (0.45); GAC1 (0.45); BCK1 (0.437); RHO2 (0.403)
Homologues (species, bitscore): COL27A1 (Homo sapiens, 55.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:43611-45461:+ | gene-YHL028W_AKU4011 | rna-NM_001179108.1_AKU4011 | cds-NP_011835.1_AKU4011 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000180.1:31311-33161:- | gene-YHL028W_BG1 | rna-NM_001179108.1_BG1 | cds-NP_011835.1_BG1 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:50268-52118:+ | gene-YHL028W_Bruggeman | rna-NM_001179108.1_Bruggeman | cds-NP_011835.1_Bruggeman | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:44536-46334:+ | gene-YHL028W_CAT1 | rna-NM_001179108.1_CAT1 | cds-NP_011835.1_CAT1 | 98.2 | 98.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:44212-46062:+ | gene-YHL028W_CBS1585 | rna-NM_001179108.1_CBS1585 | cds-NP_011835.1_CBS1585 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:36787-38604:+ | gene-YHL028W_CBS436 | rna-NM_001179108.1_CBS436 | cds-NP_011835.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:44162-46012:+ | gene-YHL028W_CBS6412 | rna-NM_001179108.1_CBS6412 | cds-NP_011835.1_CBS6412 | 97.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:43625-45475:+ | gene-YHL028W_CBS6413 | rna-NM_001179108.1_CBS6413 | cds-NP_011835.1_CBS6413 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:41924-43741:+ | gene-YHL028W_CENPK1137D | rna-NM_001179108.1_CENPK1137D | cds-NP_011835.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:43837-45693:+ | gene-YHL028W_EthanolRed | rna-NM_001179108.1_EthanolRed | cds-NP_011835.1_EthanolRed | 96.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:44159-46009:+ | gene-YHL028W_FaliES1 | rna-NM_001179108.1_FaliES1 | cds-NP_011835.1_FaliES1 | 97.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000003.1:12854-14704:+ | gene-YHL028W_JAY291 | rna-NM_001179108.1_JAY291 | cds-NP_011835.1_JAY291 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:46107-47957:+ | gene-YHL028W_MUCL30387 | rna-NM_001179108.1_MUCL30387 | cds-NP_011835.1_MUCL30387 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:47944-49794:+ | gene-YHL028W_MUCL30388 | rna-NM_001179108.1_MUCL30388 | cds-NP_011835.1_MUCL30388 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:43203-45053:+ | gene-YHL028W_MUCL39482 | rna-NM_001179108.1_MUCL39482 | cds-NP_011835.1_MUCL39482 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:47188-49038:+ | gene-YHL028W_MUCL42920 | rna-NM_001179108.1_MUCL42920 | cds-NP_011835.1_MUCL42920 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:48645-50462:+ | gene-YHL028W_NCIM3186 | rna-NM_001179108.1_NCIM3186 | cds-NP_011835.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:42688-44538:+ | gene-YHL028W_NCYC1407 | rna-NM_001179108.1_NCYC1407 | cds-NP_011835.1_NCYC1407 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:38961-40775:+ | gene-YHL028W_PE2H3 | rna-NM_001179108.1_PE2H3 | cds-NP_011835.1_PE2H3 | 98.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:46366-48216:+ | gene-YHL028W_PE2H4 | rna-NM_001179108.1_PE2H4 | cds-NP_011835.1_PE2H4 | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:48763-50580:+ | gene-YHL028W_S288C | rna-NM_001179108.1_S288C | cds-NP_011835.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:33032-34876:+ | gene-YHL028W_SA1 | rna-NM_001179108.1_SA1 | cds-NP_011835.1_SA1 | 97.9 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:45248-47104:+ | gene-YHL028W_ThermosaccDry | rna-NM_001179108.1_ThermosaccDry | cds-NP_011835.1_ThermosaccDry | 96.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:49966-51816:+ | gene-YHL028W_VR1 | rna-NM_001179108.1_VR1 | cds-NP_011835.1_VR1 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:36472-38322:+ | gene-YHL028W_ZTW1 | rna-NM_001179108.1_ZTW1 | cds-NP_011835.1_ZTW1 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:42791-44623:+ | gene-YHL028W_Sparadoxus | rna-NM_001179108.1_Sparadoxus | cds-NP_011835.1_Sparadoxus | 82.6 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |