Gene name: WBP1
Reference locus (S288C): YEL002C
Gene biotype: protein_coding
Description: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Beta subunit of the oligosaccharyl transferase glycoprotein complex; required for N-linked glycosylation of proteins in the endoplasmic reticulum; human homolog DDOST can complement yeast growth defect during down-regulation of yeast gene; Belongs to the DDOST 48 kDa subunit family
Top 10 interactors (score): OST5 (0.999); SBH1 (0.999); OST6 (0.999); SWP1 (0.999); OST2 (0.999); STT3 (0.999); OST4 (0.999); OST3 (0.999); OST1 (0.999); CNE1 (0.998); SEC61 (0.997); SBH2 (0.993); DIE2 (0.99); CWH41 (0.982); KAR2 (0.979); SEC63 (0.975); LHS1 (0.972); YPF1 (0.969); ERD2 (0.965); PDI1 (0.958)
Homologues (species, bitscore): DDOST (Homo sapiens, 120.6); Ddost (Mus musculus, 117.5); ddost (Danio rerio, 120.2); ddost (Xenopus tropicalis, 91.7); Ost48 (Drosophila melanogaster, 111.3); ostb-1 (Caenorhabditis elegans, 120.9); DGL1 (Arabidopsis thaliana, 117.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:142403-143695:- | gene-YEL002C_AKU4011 | rna-NM_001178817.3_AKU4011 | cds-NP_010914.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:281975-283267:+ | gene-YEL002C_BG1 | rna-NM_001178817.3_BG1 | cds-NP_010914.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:148935-150227:- | gene-YEL002C_Bruggeman | rna-NM_001178817.3_Bruggeman | cds-NP_010914.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:145333-146625:- | gene-YEL002C_CAT1 | rna-NM_001178817.3_CAT1 | cds-NP_010914.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:142712-144004:- | gene-YEL002C_CBS1585 | rna-NM_001178817.3_CBS1585 | cds-NP_010914.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:143991-145283:- | gene-YEL002C_CBS436 | rna-NM_001178817.3_CBS436 | cds-NP_010914.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:142606-143898:- | gene-YEL002C_CBS6412 | rna-NM_001178817.3_CBS6412 | cds-NP_010914.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:147254-148546:- | gene-YEL002C_CBS6413 | rna-NM_001178817.3_CBS6413 | cds-NP_010914.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:146549-147841:- | gene-YEL002C_CENPK1137D | rna-NM_001178817.3_CENPK1137D | cds-NP_010914.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:143068-144360:- | gene-YEL002C_EthanolRed | rna-NM_001178817.3_EthanolRed | cds-NP_010914.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:143327-144619:- | gene-YEL002C_FaliES1 | rna-NM_001178817.3_FaliES1 | cds-NP_010914.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000024.1:10308-11600:- | gene-YEL002C_JAY291 | rna-NM_001178817.3_JAY291 | cds-NP_010914.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:146637-147929:- | gene-YEL002C_MUCL30387 | rna-NM_001178817.3_MUCL30387 | cds-NP_010914.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:143158-144450:- | gene-YEL002C_MUCL30388 | rna-NM_001178817.3_MUCL30388 | cds-NP_010914.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:141748-143040:- | gene-YEL002C_MUCL39482 | rna-NM_001178817.3_MUCL39482 | cds-NP_010914.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:146344-147636:- | gene-YEL002C_MUCL42920 | rna-NM_001178817.3_MUCL42920 | cds-NP_010914.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:148721-150013:- | gene-YEL002C_NCIM3186 | rna-NM_001178817.3_NCIM3186 | cds-NP_010914.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:146824-148116:- | gene-YEL002C_NCYC1407 | rna-NM_001178817.3_NCYC1407 | cds-NP_010914.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:151135-152427:- | gene-YEL002C_PE2H3 | rna-NM_001178817.3_PE2H3 | cds-NP_010914.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:147050-148342:- | gene-YEL002C_PE2H4 | rna-NM_001178817.3_PE2H4 | cds-NP_010914.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:148722-150014:- | gene-YEL002C_S288C | rna-NM_001178817.3_S288C | cds-NP_010914.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:93577-94869:+ | gene-YEL002C_SA1 | rna-NM_001178817.3_SA1 | cds-NP_010914.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:143733-145025:- | gene-YEL002C_ThermosaccDry | rna-NM_001178817.3_ThermosaccDry | cds-NP_010914.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:143226-144518:- | gene-YEL002C_VR1 | rna-NM_001178817.3_VR1 | cds-NP_010914.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:141761-143053:- | gene-YEL002C_ZTW1 | rna-NM_001178817.3_ZTW1 | cds-NP_010914.3_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:146439-147731:- | gene-YEL002C_Sparadoxus | rna-NM_001178817.3_Sparadoxus | cds-NP_010914.3_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |