Gene name: VTC5
Reference locus (S288C): YDR089W
Gene biotype: protein_coding
Description: Uncharacterized protein YDR089W; Novel subunit of the vacuolar transporter chaperone complex; vacuolar transmembrane protein that regulates biosynthesis of polyphosphate; deletion reduces and overexpression increases polyP accumulation; SPX domain (Syg1, Pho81, Xpr1)-containing protein involved in phosphate homeostasis; relocalizes from vacuole to cytoplasm upon DNA replication stress
Top 10 interactors (score): VTC4 (0.953); VTC1 (0.951); VTC2 (0.946); VTC3 (0.94); YDR124W (0.766); CCT2 (0.72); CCT4 (0.72); TCP1 (0.72); CCT3 (0.72); CCT7 (0.72); CCT6 (0.72); CCT5 (0.72); CCT8 (0.72); PPX1 (0.572); TAF2 (0.499); GDE1 (0.483); RRP1 (0.482); SLU7 (0.454); CCZ1 (0.453); PHO91 (0.452)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:599665-602274:+ | gene-YDR089W_AKU4011 | rna-NM_001180397.1_AKU4011 | cds-NP_010374.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:523054-525663:- | gene-YDR089W_BG1 | rna-NM_001180397.1_BG1 | cds-NP_010374.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:631892-634501:+ | gene-YDR089W_Bruggeman | rna-NM_001180397.1_Bruggeman | cds-NP_010374.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:616586-619195:+ | gene-YDR089W_CAT1 | rna-NM_001180397.1_CAT1 | cds-NP_010374.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:590686-593295:+ | gene-YDR089W_CBS1585 | rna-NM_001180397.1_CBS1585 | cds-NP_010374.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:615698-618307:+ | gene-YDR089W_CBS436 | rna-NM_001180397.1_CBS436 | cds-NP_010374.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:587098-589707:+ | gene-YDR089W_CBS6412 | rna-NM_001180397.1_CBS6412 | cds-NP_010374.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:615631-618240:+ | gene-YDR089W_CBS6413 | rna-NM_001180397.1_CBS6413 | cds-NP_010374.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:621151-623760:+ | gene-YDR089W_CENPK1137D | rna-NM_001180397.1_CENPK1137D | cds-NP_010374.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:601456-604065:+ | gene-YDR089W_EthanolRed | rna-NM_001180397.1_EthanolRed | cds-NP_010374.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:608250-610859:+ | gene-YDR089W_FaliES1 | rna-NM_001180397.1_FaliES1 | cds-NP_010374.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000358.1:20407-23016:- | gene-YDR089W_JAY291 | rna-NM_001180397.1_JAY291 | cds-NP_010374.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:616511-619120:+ | gene-YDR089W_MUCL30387 | rna-NM_001180397.1_MUCL30387 | cds-NP_010374.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:606820-609429:+ | gene-YDR089W_MUCL30388 | rna-NM_001180397.1_MUCL30388 | cds-NP_010374.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:592056-594665:+ | gene-YDR089W_MUCL39482 | rna-NM_001180397.1_MUCL39482 | cds-NP_010374.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:523511-526120:+ | gene-YDR089W_MUCL42920 | rna-NM_001180397.1_MUCL42920 | cds-NP_010374.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:622035-624644:+ | gene-YDR089W_NCIM3186 | rna-NM_001180397.1_NCIM3186 | cds-NP_010374.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:590963-593572:+ | gene-YDR089W_NCYC1407 | rna-NM_001180397.1_NCYC1407 | cds-NP_010374.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:610430-613039:+ | gene-YDR089W_PE2H3 | rna-NM_001180397.1_PE2H3 | cds-NP_010374.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:609735-612344:+ | gene-YDR089W_PE2H4 | rna-NM_001180397.1_PE2H4 | cds-NP_010374.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:622112-624721:+ | gene-YDR089W_S288C | rna-NM_001180397.1_S288C | cds-NP_010374.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000011.1:20620-23229:- | gene-YDR089W_SA1 | rna-NM_001180397.1_SA1 | cds-NP_010374.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:607780-610389:+ | gene-YDR089W_ThermosaccDry | rna-NM_001180397.1_ThermosaccDry | cds-NP_010374.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:620330-622939:+ | gene-YDR089W_VR1 | rna-NM_001180397.1_VR1 | cds-NP_010374.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:605362-607971:+ | gene-YDR089W_ZTW1 | rna-NM_001180397.1_ZTW1 | cds-NP_010374.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:609807-612413:+ | gene-YDR089W_Sparadoxus | rna-NM_001180397.1_Sparadoxus | cds-NP_010374.1_Sparadoxus | 88.7 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |