Gene name: VRP1
Reference locus (S288C): YLR337C
Gene biotype: protein_coding
Description: Verprolin, proline-rich actin-associated protein; involved in cytoskeletal organization and cytokinesis; promotes actin nucleation and endocytosis; related to mammalian Wiskott-Aldrich syndrome protein (WASP)-interacting protein (WIP); Belongs to the verprolin family
Top 10 interactors (score): LAS17 (0.999); ACT1 (0.998); MYO5 (0.998); MYO3 (0.997); BZZ1 (0.994); ARP2 (0.993); HOF1 (0.993); RVS167 (0.991); SLA2 (0.99); END3 (0.987); BBC1 (0.982); SLA1 (0.966); ABP1 (0.966); ARP3 (0.962); RVS161 (0.944); MYO1 (0.941); PAN1 (0.932); PFY1 (0.931); SAC6 (0.924); COF1 (0.923)
Homologues (species, bitscore): WIPF2 (Homo sapiens, 78.6); Wipf3 (Mus musculus, 89.7); SPTBN5 (Danio rerio, 80.1); wipf1 (Xenopus tropicalis, 81.3); Vrp1 (Drosophila melanogaster, 56.6); wip-1 (Caenorhabditis elegans, 92.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:752176-754629:- | gene-YLR337C_AKU4011 | rna-NM_001182226.1_AKU4011 | cds-NP_013441.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:18740-21193:- | gene-YLR337C_BG1 | rna-NM_001182226.1_BG1 | cds-NP_013441.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:788525-790978:- | gene-YLR337C_Bruggeman | rna-NM_001182226.1_Bruggeman | cds-NP_013441.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:785481-787934:- | gene-YLR337C_CAT1 | rna-NM_001182226.1_CAT1 | cds-NP_013441.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:787229-789682:- | gene-YLR337C_CBS1585 | rna-NM_001182226.1_CBS1585 | cds-NP_013441.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:770537-772990:- | gene-YLR337C_CBS436 | rna-NM_001182226.1_CBS436 | cds-NP_013441.1_CBS436 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:824220-826676:- | gene-YLR337C_CBS6412 | rna-NM_001182226.1_CBS6412 | cds-NP_013441.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:788090-790546:- | gene-YLR337C_CBS6413 | rna-NM_001182226.1_CBS6413 | cds-NP_013441.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:787270-789723:- | gene-YLR337C_CENPK1137D | rna-NM_001182226.1_CENPK1137D | cds-NP_013441.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:744395-746848:- | gene-YLR337C_EthanolRed | rna-NM_001182226.1_EthanolRed | cds-NP_013441.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:773596-776049:- | gene-YLR337C_FaliES1 | rna-NM_001182226.1_FaliES1 | cds-NP_013441.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000315.1:13178-15631:+ | gene-YLR337C_JAY291 | rna-NM_001182226.1_JAY291 | cds-NP_013441.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:786978-789431:- | gene-YLR337C_MUCL30387 | rna-NM_001182226.1_MUCL30387 | cds-NP_013441.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:792324-794777:- | gene-YLR337C_MUCL30388 | rna-NM_001182226.1_MUCL30388 | cds-NP_013441.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:788448-790901:- | gene-YLR337C_MUCL39482 | rna-NM_001182226.1_MUCL39482 | cds-NP_013441.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:783725-786178:- | gene-YLR337C_MUCL42920 | rna-NM_001182226.1_MUCL42920 | cds-NP_013441.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:802627-805080:- | gene-YLR337C_NCIM3186 | rna-NM_001182226.1_NCIM3186 | cds-NP_013441.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:797668-800121:- | gene-YLR337C_NCYC1407 | rna-NM_001182226.1_NCYC1407 | cds-NP_013441.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:784301-786754:- | gene-YLR337C_PE2H3 | rna-NM_001182226.1_PE2H3 | cds-NP_013441.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:784045-786498:- | gene-YLR337C_PE2H4 | rna-NM_001182226.1_PE2H4 | cds-NP_013441.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:802653-805106:- | gene-YLR337C_S288C | rna-NM_001182226.1_S288C | cds-NP_013441.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:243865-246318:+ | gene-YLR337C_SA1 | rna-NM_001182226.1_SA1 | cds-NP_013441.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:775488-777941:- | gene-YLR337C_ThermosaccDry | rna-NM_001182226.1_ThermosaccDry | cds-NP_013441.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:788542-790995:- | gene-YLR337C_VR1 | rna-NM_001182226.1_VR1 | cds-NP_013441.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:113877-116330:- | gene-YLR337C_ZTW1 | rna-NM_001182226.1_ZTW1 | cds-NP_013441.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:761879-764364:- | gene-YLR337C_Sparadoxus | rna-NM_001182226.1_Sparadoxus | cds-NP_013441.1_Sparadoxus | 83.2 | 99.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |