Gene name: VPS64
Reference locus (S288C): YDR200C
Gene biotype: protein_coding
Description: Vacuolar protein sorting-associated protein 64; Protein required for cytoplasm to vacuole targeting of proteins; forms a complex with Far3p and Far7p to Far11p involved in recovery from pheromone-induced cell cycle arrest; mutant has increased aneuploidy tolerance; VPS64 has a paralog, FAR10, that arose from the whole genome duplication
Top 10 interactors (score): FAR11 (0.999); FAR3 (0.985); FAR8 (0.985); FAR7 (0.977); TPD3 (0.973); PPH21 (0.847); PPG1 (0.841); SPS1 (0.838); KIC1 (0.838); VPS61 (0.816); RAD9 (0.781); YDR199W (0.761); PPH22 (0.761); SPT23 (0.76); TEL1 (0.754); RTT107 (0.742); YMR052C-A (0.618); BIO2 (0.609); UFD4 (0.584); RAD53 (0.566)
Homologues (species, bitscore): SLMAP (Homo sapiens, 65.1); Slmap (Mus musculus, 62.4); slmapa (Danio rerio, 64.3); slmap (Xenopus tropicalis, 64.7); Slmap (Drosophila melanogaster, 64.7); M4.1 (Caenorhabditis elegans, 58.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:822807-824621:- | gene-YDR200C_AKU4011 | rna-NM_001180508.3_AKU4011 | cds-NP_010486.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:301193-303007:+ | gene-YDR200C_BG1 | rna-NM_001180508.3_BG1 | cds-NP_010486.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:855220-857034:- | gene-YDR200C_Bruggeman | rna-NM_001180508.3_Bruggeman | cds-NP_010486.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:842492-844306:- | gene-YDR200C_CAT1 | rna-NM_001180508.3_CAT1 | cds-NP_010486.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:813167-814981:- | gene-YDR200C_CBS1585 | rna-NM_001180508.3_CBS1585 | cds-NP_010486.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:842176-843990:- | gene-YDR200C_CBS436 | rna-NM_001180508.3_CBS436 | cds-NP_010486.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:809974-811788:- | gene-YDR200C_CBS6412 | rna-NM_001180508.3_CBS6412 | cds-NP_010486.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:840518-842332:- | gene-YDR200C_CBS6413 | rna-NM_001180508.3_CBS6413 | cds-NP_010486.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:853111-854925:- | gene-YDR200C_CENPK1137D | rna-NM_001180508.3_CENPK1137D | cds-NP_010486.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:823556-825370:- | gene-YDR200C_EthanolRed | rna-NM_001180508.3_EthanolRed | cds-NP_010486.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:831768-833582:- | gene-YDR200C_FaliES1 | rna-NM_001180508.3_FaliES1 | cds-NP_010486.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000068.1:15764-17578:+ | gene-YDR200C_JAY291 | rna-NM_001180508.3_JAY291 | cds-NP_010486.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:840873-842687:- | gene-YDR200C_MUCL30387 | rna-NM_001180508.3_MUCL30387 | cds-NP_010486.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:829122-830936:- | gene-YDR200C_MUCL30388 | rna-NM_001180508.3_MUCL30388 | cds-NP_010486.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:814614-816428:- | gene-YDR200C_MUCL39482 | rna-NM_001180508.3_MUCL39482 | cds-NP_010486.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:753318-755132:- | gene-YDR200C_MUCL42920 | rna-NM_001180508.3_MUCL42920 | cds-NP_010486.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:854202-856016:- | gene-YDR200C_NCIM3186 | rna-NM_001180508.3_NCIM3186 | cds-NP_010486.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:817748-819562:- | gene-YDR200C_NCYC1407 | rna-NM_001180508.3_NCYC1407 | cds-NP_010486.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:834505-836319:- | gene-YDR200C_PE2H3 | rna-NM_001180508.3_PE2H3 | cds-NP_010486.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:833804-835618:- | gene-YDR200C_PE2H4 | rna-NM_001180508.3_PE2H4 | cds-NP_010486.3_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:854279-856093:- | gene-YDR200C_S288C | rna-NM_001180508.3_S288C | cds-NP_010486.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:199983-201797:- | gene-YDR200C_SA1 | rna-NM_001180508.3_SA1 | cds-NP_010486.3_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:829923-831737:- | gene-YDR200C_ThermosaccDry | rna-NM_001180508.3_ThermosaccDry | cds-NP_010486.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:845152-846966:- | gene-YDR200C_VR1 | rna-NM_001180508.3_VR1 | cds-NP_010486.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:92643-94457:- | gene-YDR200C_ZTW1 | rna-NM_001180508.3_ZTW1 | cds-NP_010486.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:834789-836603:- | gene-YDR200C_Sparadoxus | rna-NM_001180508.3_Sparadoxus | cds-NP_010486.3_Sparadoxus | 88.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |