Gene name: VPS63
Reference locus (S288C): YLR261C
Gene biotype: protein_coding
Description: Uncharacterized protein VPS63; Putative protein of unknown function; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene YPT6; deletion causes a vacuolar protein sorting defect; decreased levels of protein in enolase deficient mutant
Top 10 interactors (score): YPT6 (0.966); YHI9 (0.712); YNL296W (0.712); VPS68 (0.712); YJL120W (0.699); QRI5 (0.616); UBP16 (0.616); RNY1 (0.595); LIP2 (0.575); MAP1 (0.569); LRE1 (0.566); VPS45 (0.526); CKB2 (0.524); VTA1 (0.505); VPS64 (0.499); CBP3 (0.497); SKP2 (0.489); VPS51 (0.489); VMA16 (0.487); APS3 (0.485)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:616502-616828:- | gene-YLR261C_AKU4011 | rna-NM_001182148.1_AKU4011 | cds-NP_013362.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:115065-115391:+ | gene-YLR261C_BG1 | rna-NM_001182148.1_BG1 | cds-NP_013362.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:650744-651070:- | gene-YLR261C_Bruggeman | rna-NM_001182148.1_Bruggeman | cds-NP_013362.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:649928-650254:- | gene-YLR261C_CAT1 | rna-NM_001182148.1_CAT1 | cds-NP_013362.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:651997-652323:- | gene-YLR261C_CBS1585 | rna-NM_001182148.1_CBS1585 | cds-NP_013362.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:636219-636545:- | gene-YLR261C_CBS436 | rna-NM_001182148.1_CBS436 | cds-NP_013362.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:614972-615298:- | gene-YLR261C_CBS6412 | rna-NM_001182148.1_CBS6412 | cds-NP_013362.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:652293-652619:- | gene-YLR261C_CBS6413 | rna-NM_001182148.1_CBS6413 | cds-NP_013362.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:652820-653146:- | gene-YLR261C_CENPK1137D | rna-NM_001182148.1_CENPK1137D | cds-NP_013362.1_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:610702-611028:- | gene-YLR261C_EthanolRed | rna-NM_001182148.1_EthanolRed | cds-NP_013362.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:639533-639859:- | gene-YLR261C_FaliES1 | rna-NM_001182148.1_FaliES1 | cds-NP_013362.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:19552-19878:+ | gene-YLR261C_JAY291 | rna-NM_001182148.1_JAY291 | cds-NP_013362.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:651604-651930:- | gene-YLR261C_MUCL30387 | rna-NM_001182148.1_MUCL30387 | cds-NP_013362.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:656369-656695:- | gene-YLR261C_MUCL30388 | rna-NM_001182148.1_MUCL30388 | cds-NP_013362.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:652978-653304:- | gene-YLR261C_MUCL39482 | rna-NM_001182148.1_MUCL39482 | cds-NP_013362.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:647748-648074:- | gene-YLR261C_MUCL42920 | rna-NM_001182148.1_MUCL42920 | cds-NP_013362.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:668211-668537:- | gene-YLR261C_NCIM3186 | rna-NM_001182148.1_NCIM3186 | cds-NP_013362.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:639965-640291:- | gene-YLR261C_NCYC1407 | rna-NM_001182148.1_NCYC1407 | cds-NP_013362.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:643734-644060:- | gene-YLR261C_PE2H3 | rna-NM_001182148.1_PE2H3 | cds-NP_013362.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:643478-643804:- | gene-YLR261C_PE2H4 | rna-NM_001182148.1_PE2H4 | cds-NP_013362.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:668237-668563:- | gene-YLR261C_S288C | rna-NM_001182148.1_S288C | cds-NP_013362.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:19797-20123:+ | gene-YLR261C_SA1 | rna-NM_001182148.1_SA1 | cds-NP_013362.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:641496-641822:- | gene-YLR261C_ThermosaccDry | rna-NM_001182148.1_ThermosaccDry | cds-NP_013362.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:652810-653136:- | gene-YLR261C_VR1 | rna-NM_001182148.1_VR1 | cds-NP_013362.1_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:165787-166113:- | gene-YLR261C_ZTW1 | rna-NM_001182148.1_ZTW1 | cds-NP_013362.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:627290-627616:- | gene-YLR261C_Sparadoxus | rna-NM_001182148.1_Sparadoxus | cds-NP_013362.1_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |