Gene name: VPH2
Reference locus (S288C): YKL119C
Gene biotype: protein_coding
Description: Integral membrane protein required for V-ATPase function; not an actual component of the vacuolar H+-ATPase (V-ATPase) complex; functions in the assembly of the V-ATPase; localized to the endoplasmic reticulum (ER); involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner
Top 10 interactors (score): VMA22 (0.996); VPH1 (0.972); VMA21 (0.84); VMA6 (0.834); VMA5 (0.794); SSM4 (0.785); STV1 (0.784); VMA3 (0.734); VMA13 (0.716); YKL118W (0.713); DEG1 (0.71); VMA11 (0.707); SHR3 (0.671); APS3 (0.65); VMA1 (0.617); VMA8 (0.607); HRD1 (0.569); MATALPHA2 (0.569); HMLALPHA2 (0.567); VMA2 (0.562)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:205145-205792:- | gene-YKL119C_AKU4011 | rna-NM_001179685.1_AKU4011 | cds-NP_012803.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:182267-182914:- | gene-YKL119C_BG1 | rna-NM_001179685.1_BG1 | cds-NP_012803.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:223060-223707:- | gene-YKL119C_Bruggeman | rna-NM_001179685.1_Bruggeman | cds-NP_012803.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:218113-218760:- | gene-YKL119C_CAT1 | rna-NM_001179685.1_CAT1 | cds-NP_012803.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:217378-218025:- | gene-YKL119C_CBS1585 | rna-NM_001179685.1_CBS1585 | cds-NP_012803.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:215965-216612:- | gene-YKL119C_CBS436 | rna-NM_001179685.1_CBS436 | cds-NP_012803.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:202008-202655:- | gene-YKL119C_CBS6412 | rna-NM_001179685.1_CBS6412 | cds-NP_012803.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:217841-218488:- | gene-YKL119C_CBS6413 | rna-NM_001179685.1_CBS6413 | cds-NP_012803.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:218218-218865:- | gene-YKL119C_CENPK1137D | rna-NM_001179685.1_CENPK1137D | cds-NP_012803.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:215877-216524:- | gene-YKL119C_EthanolRed | rna-NM_001179685.1_EthanolRed | cds-NP_012803.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:216690-217337:- | gene-YKL119C_FaliES1 | rna-NM_001179685.1_FaliES1 | cds-NP_012803.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:38983-39630:- | gene-YKL119C_JAY291 | rna-NM_001179685.1_JAY291 | cds-NP_012803.1_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:224881-225528:- | gene-YKL119C_MUCL30387 | rna-NM_001179685.1_MUCL30387 | cds-NP_012803.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:219252-219899:- | gene-YKL119C_MUCL30388 | rna-NM_001179685.1_MUCL30388 | cds-NP_012803.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:217172-217819:- | gene-YKL119C_MUCL39482 | rna-NM_001179685.1_MUCL39482 | cds-NP_012803.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:221548-222195:- | gene-YKL119C_MUCL42920 | rna-NM_001179685.1_MUCL42920 | cds-NP_012803.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:218559-219206:- | gene-YKL119C_NCIM3186 | rna-NM_001179685.1_NCIM3186 | cds-NP_012803.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:217354-218001:- | gene-YKL119C_NCYC1407 | rna-NM_001179685.1_NCYC1407 | cds-NP_012803.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:224453-225100:- | gene-YKL119C_PE2H3 | rna-NM_001179685.1_PE2H3 | cds-NP_012803.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:220737-221384:- | gene-YKL119C_PE2H4 | rna-NM_001179685.1_PE2H4 | cds-NP_012803.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:218570-219217:- | gene-YKL119C_S288C | rna-NM_001179685.1_S288C | cds-NP_012803.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:134693-135340:- | gene-YKL119C_SA1 | rna-NM_001179685.1_SA1 | cds-NP_012803.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:217390-218037:- | gene-YKL119C_ThermosaccDry | rna-NM_001179685.1_ThermosaccDry | cds-NP_012803.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:216704-217351:- | gene-YKL119C_VR1 | rna-NM_001179685.1_VR1 | cds-NP_012803.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:215919-216566:- | gene-YKL119C_ZTW1 | rna-NM_001179685.1_ZTW1 | cds-NP_012803.1_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:233192-233839:- | gene-YKL119C_Sparadoxus | rna-NM_001179685.1_Sparadoxus | cds-NP_012803.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |