Gene name: VNX1
Reference locus (S288C): YNL321W
Gene biotype: protein_coding
Description: Low affinity vacuolar monovalent cation/H(+) antiporter; Calcium/H+ antiporter localized to the endoplasmic reticulum membrane; member of the calcium exchanger (CAX) family; potential Cdc28p substrate; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family
Top 10 interactors (score): NHX1 (0.971); KHA1 (0.949); CCH1 (0.924); NHA1 (0.922); YLH47 (0.884); MDM38 (0.863); ECM27 (0.857); TRK1 (0.817); VMA1 (0.805); ENA1 (0.804); PMC1 (0.796); MID1 (0.786); YDL206W (0.77); TOK1 (0.759); ENA2 (0.738); PMR1 (0.725); YIL029C (0.697); YDL183C (0.69); TRK2 (0.677); PHO89 (0.628)
Homologues (species, bitscore): cax1 (Danio rerio, 307.0); LOC100127794 (Xenopus tropicalis, 231.1); CAX5 (Arabidopsis thaliana, 104.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:28498-31224:+ | gene-YNL321W_AKU4011 | rna-NM_001183159.1_AKU4011 | cds-NP_014078.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000074.1:59414-62140:- | gene-YNL321W_BG1 | rna-NM_001183159.1_BG1 | cds-NP_014078.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:37838-40564:+ | gene-YNL321W_Bruggeman | rna-NM_001183159.1_Bruggeman | cds-NP_014078.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:40461-43187:+ | gene-YNL321W_CAT1 | rna-NM_001183159.1_CAT1 | cds-NP_014078.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:28832-31558:+ | gene-YNL321W_CBS1585 | rna-NM_001183159.1_CBS1585 | cds-NP_014078.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:29325-32051:+ | gene-YNL321W_CBS436 | rna-NM_001183159.1_CBS436 | cds-NP_014078.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:25489-28215:+ | gene-YNL321W_CBS6412 | rna-NM_001183159.1_CBS6412 | cds-NP_014078.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:25678-28404:+ | gene-YNL321W_CBS6413 | rna-NM_001183159.1_CBS6413 | cds-NP_014078.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:28523-31249:+ | gene-YNL321W_CENPK1137D | rna-NM_001183159.1_CENPK1137D | cds-NP_014078.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:25524-28250:+ | gene-YNL321W_EthanolRed | rna-NM_001183159.1_EthanolRed | cds-NP_014078.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:26423-29149:+ | gene-YNL321W_FaliES1 | rna-NM_001183159.1_FaliES1 | cds-NP_014078.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000390.1:26369-29095:- | gene-YNL321W_JAY291 | rna-NM_001183159.1_JAY291 | cds-NP_014078.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:38096-40822:+ | gene-YNL321W_MUCL30387 | rna-NM_001183159.1_MUCL30387 | cds-NP_014078.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:31124-33850:+ | gene-YNL321W_MUCL30388 | rna-NM_001183159.1_MUCL30388 | cds-NP_014078.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:26466-29192:+ | gene-YNL321W_MUCL39482 | rna-NM_001183159.1_MUCL39482 | cds-NP_014078.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:28159-30885:+ | gene-YNL321W_MUCL42920 | rna-NM_001183159.1_MUCL42920 | cds-NP_014078.1_MUCL42920 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:34665-37391:+ | gene-YNL321W_NCIM3186 | rna-NM_001183159.1_NCIM3186 | cds-NP_014078.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:27798-30524:+ | gene-YNL321W_NCYC1407 | rna-NM_001183159.1_NCYC1407 | cds-NP_014078.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:25003-27729:+ | gene-YNL321W_PE2H3 | rna-NM_001183159.1_PE2H3 | cds-NP_014078.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:24391-27117:+ | gene-YNL321W_PE2H4 | rna-NM_001183159.1_PE2H4 | cds-NP_014078.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:34696-37422:+ | gene-YNL321W_S288C | rna-NM_001183159.1_S288C | cds-NP_014078.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000052.1:59793-62519:- | gene-YNL321W_SA1 | rna-NM_001183159.1_SA1 | cds-NP_014078.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:27280-30006:+ | gene-YNL321W_ThermosaccDry | rna-NM_001183159.1_ThermosaccDry | cds-NP_014078.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:39818-42544:+ | gene-YNL321W_VR1 | rna-NM_001183159.1_VR1 | cds-NP_014078.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000029.1:18489-21215:+ | gene-YNL321W_ZTW1 | rna-NM_001183159.1_ZTW1 | cds-NP_014078.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:36456-39182:+ | gene-YNL321W_Sparadoxus | rna-NM_001183159.1_Sparadoxus | cds-NP_014078.1_Sparadoxus | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |