Gene name: VMR1
Reference locus (S288C): YHL035C
Gene biotype: protein_coding
Description: ABC transporter ATP-binding protein/permease VMR1; Vacuolar membrane protein; involved in multiple drug resistance and metal sensitivity; ATP-binding cassette (ABC) family member involved in drug transport; potential Cdc28p substrate; induced under respiratory conditions; VMR1 has a paralog, YBT1, that arose from the whole genome duplication
Top 10 interactors (score): YOL075C (0.764); YDR061W (0.749); PDR15 (0.703); YHR045W (0.696); YLR126C (0.693); PDR12 (0.676); CRF1 (0.655); YOR1 (0.63); ARN1 (0.616); CFT2 (0.61); STE6 (0.609); PDR11 (0.604); YTP1 (0.595); NTE1 (0.579); PHM7 (0.577); PDR10 (0.568); PDR5 (0.565); FMP23 (0.56); AUS1 (0.558); FRE8 (0.503)
Homologues (species, bitscore): ABCC1 (Homo sapiens, 732.6); Abcc1 (Mus musculus, 735.3); abcc2 (Danio rerio, 720.7); abcc2 (Xenopus tropicalis, 736.5); MRP (Drosophila melanogaster, 746.5); mrp-2 (Caenorhabditis elegans, 706.1); ABCC12 (Arabidopsis thaliana, 672.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:22833-27611:- | gene-YHL035C_AKU4011 | rna-NM_001179115.1_AKU4011 | cds-NP_011828.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000180.1:49213-53991:+ | gene-YHL035C_BG1 | rna-NM_001179115.1_BG1 | cds-NP_011828.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:29497-34275:- | gene-YHL035C_Bruggeman | rna-NM_001179115.1_Bruggeman | cds-NP_011828.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:23752-28530:- | gene-YHL035C_CAT1 | rna-NM_001179115.1_CAT1 | cds-NP_011828.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:23436-28214:- | gene-YHL035C_CBS1585 | rna-NM_001179115.1_CBS1585 | cds-NP_011828.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:16022-20800:- | gene-YHL035C_CBS436 | rna-NM_001179115.1_CBS436 | cds-NP_011828.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:23385-28163:- | gene-YHL035C_CBS6412 | rna-NM_001179115.1_CBS6412 | cds-NP_011828.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:22851-27629:- | gene-YHL035C_CBS6413 | rna-NM_001179115.1_CBS6413 | cds-NP_011828.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:21143-25921:- | gene-YHL035C_CENPK1137D | rna-NM_001179115.1_CENPK1137D | cds-NP_011828.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:23063-27841:- | gene-YHL035C_EthanolRed | rna-NM_001179115.1_EthanolRed | cds-NP_011828.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:23387-28165:- | gene-YHL035C_FaliES1 | rna-NM_001179115.1_FaliES1 | cds-NP_011828.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000157.1:15341-20119:- | gene-YHL035C_JAY291 | rna-NM_001179115.1_JAY291 | cds-NP_011828.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:25331-30109:- | gene-YHL035C_MUCL30387 | rna-NM_001179115.1_MUCL30387 | cds-NP_011828.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:27168-31946:- | gene-YHL035C_MUCL30388 | rna-NM_001179115.1_MUCL30388 | cds-NP_011828.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:22427-27205:- | gene-YHL035C_MUCL39482 | rna-NM_001179115.1_MUCL39482 | cds-NP_011828.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:26398-31176:- | gene-YHL035C_MUCL42920 | rna-NM_001179115.1_MUCL42920 | cds-NP_011828.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:27860-32638:- | gene-YHL035C_NCIM3186 | rna-NM_001179115.1_NCIM3186 | cds-NP_011828.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:21913-26691:- | gene-YHL035C_NCYC1407 | rna-NM_001179115.1_NCYC1407 | cds-NP_011828.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:18204-22982:- | gene-YHL035C_PE2H3 | rna-NM_001179115.1_PE2H3 | cds-NP_011828.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:25580-30358:- | gene-YHL035C_PE2H4 | rna-NM_001179115.1_PE2H4 | cds-NP_011828.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:27978-32756:- | gene-YHL035C_S288C | rna-NM_001179115.1_S288C | cds-NP_011828.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:12271-17049:- | gene-YHL035C_SA1 | rna-NM_001179115.1_SA1 | cds-NP_011828.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:24476-29254:- | gene-YHL035C_ThermosaccDry | rna-NM_001179115.1_ThermosaccDry | cds-NP_011828.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:29186-33964:- | gene-YHL035C_VR1 | rna-NM_001179115.1_VR1 | cds-NP_011828.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:15691-20469:- | gene-YHL035C_ZTW1 | rna-NM_001179115.1_ZTW1 | cds-NP_011828.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:22036-26821:- | gene-YHL035C_Sparadoxus | rna-NM_001179115.1_Sparadoxus | cds-NP_011828.1_Sparadoxus | 85.3 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |