Gene name: VMA9
Reference locus (S288C): YCL005W-A
Gene biotype: protein_coding
Description: Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex; essential for vacuolar acidification; interacts with the V-ATPase assembly factor Vma21p in the ER; involved in V0 biogenesis
Top 10 interactors (score): VPH1 (0.993); VMA16 (0.989); VMA6 (0.989); VMA8 (0.986); VMA11 (0.986); STV1 (0.985); VMA7 (0.985); VMA10 (0.985); VMA3 (0.984); VMA13 (0.984); VMA4 (0.984); VMA5 (0.982); VMA2 (0.98); YCL007C (0.96); VMA1 (0.919); MET3 (0.904); VOA1 (0.817); YPR170W-B (0.8); ATP14 (0.771); ATP16 (0.721)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:101742-102136:+ | gene-YCL005W-A_AKU4011 | rna-NM_001184518.1_AKU4011 | cds-NP_958835.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:43899-44293:- | gene-YCL005W-A_BG1 | rna-NM_001184518.1_BG1 | cds-NP_958835.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:96325-96719:+ | gene-YCL005W-A_Bruggeman | rna-NM_001184518.1_Bruggeman | cds-NP_958835.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:101471-101869:+ | gene-YCL005W-A_CAT1 | rna-NM_001184518.1_CAT1 | cds-NP_958835.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:102390-102784:+ | gene-YCL005W-A_CBS1585 | rna-NM_001184518.1_CBS1585 | cds-NP_958835.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:107306-107700:+ | gene-YCL005W-A_CBS436 | rna-NM_001184518.1_CBS436 | cds-NP_958835.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:89849-90243:+ | gene-YCL005W-A_CBS6412 | rna-NM_001184518.1_CBS6412 | cds-NP_958835.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:101697-102091:+ | gene-YCL005W-A_CBS6413 | rna-NM_001184518.1_CBS6413 | cds-NP_958835.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:106498-106892:+ | gene-YCL005W-A_CENPK1137D | rna-NM_001184518.1_CENPK1137D | cds-NP_958835.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:99759-100153:+ | gene-YCL005W-A_EthanolRed | rna-NM_001184518.1_EthanolRed | cds-NP_958835.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:102052-102446:+ | gene-YCL005W-A_FaliES1 | rna-NM_001184518.1_FaliES1 | cds-NP_958835.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:16224-16618:+ | gene-YCL005W-A_JAY291 | rna-NM_001184518.1_JAY291 | cds-NP_958835.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:94760-95154:+ | gene-YCL005W-A_MUCL30387 | rna-NM_001184518.1_MUCL30387 | cds-NP_958835.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:94317-94711:+ | gene-YCL005W-A_MUCL30388 | rna-NM_001184518.1_MUCL30388 | cds-NP_958835.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:102807-103201:+ | gene-YCL005W-A_MUCL39482 | rna-NM_001184518.1_MUCL39482 | cds-NP_958835.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:98040-98434:+ | gene-YCL005W-A_MUCL42920 | rna-NM_001184518.1_MUCL42920 | cds-NP_958835.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:106655-107049:+ | gene-YCL005W-A_NCIM3186 | rna-NM_001184518.1_NCIM3186 | cds-NP_958835.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:103289-103683:+ | gene-YCL005W-A_NCYC1407 | rna-NM_001184518.1_NCYC1407 | cds-NP_958835.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:107458-107852:+ | gene-YCL005W-A_PE2H3 | rna-NM_001184518.1_PE2H3 | cds-NP_958835.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:107418-107812:+ | gene-YCL005W-A_PE2H4 | rna-NM_001184518.1_PE2H4 | cds-NP_958835.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:107023-107417:+ | gene-YCL005W-A_S288C | rna-NM_001184518.1_S288C | cds-NP_958835.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:43915-44309:- | gene-YCL005W-A_SA1 | rna-NM_001184518.1_SA1 | cds-NP_958835.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:102625-103019:+ | gene-YCL005W-A_ThermosaccDry | rna-NM_001184518.1_ThermosaccDry | cds-NP_958835.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:113265-113659:+ | gene-YCL005W-A_VR1 | rna-NM_001184518.1_VR1 | cds-NP_958835.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:101563-101957:+ | gene-YCL005W-A_ZTW1 | rna-NM_001184518.1_ZTW1 | cds-NP_958835.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:131802-132196:+ | gene-YCL005W-A_Sparadoxus | rna-NM_001184518.1_Sparadoxus | cds-NP_958835.1_Sparadoxus | 97.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |