Gene name: VMA8
Reference locus (S288C): YEL051W
Gene biotype: protein_coding
Description: Subunit D of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; plays a role in the coupling of proton transport and ATP hydrolysis; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits
Top 10 interactors (score): VMA4 (0.999); VMA16 (0.999); VPH1 (0.999); VMA7 (0.999); VMA11 (0.999); STV1 (0.999); VMA13 (0.999); VMA1 (0.999); VMA3 (0.999); VMA10 (0.999); VMA2 (0.999); VMA5 (0.999); VMA6 (0.999); VMA9 (0.986); DLD2 (0.968); INO1 (0.967); SGT2 (0.962); ATP1 (0.954); ATP7 (0.939); ATP2 (0.933)
Homologues (species, bitscore): ATP6V1D (Homo sapiens, 238.0); Atp6v1d (Mus musculus, 237.3); atp6v1d (Danio rerio, 234.2); atp6v1d (Xenopus tropicalis, 238.0); Vha36-1 (Drosophila melanogaster, 230.7); vha-14 (Caenorhabditis elegans, 242.7); AT3G58730 (Arabidopsis thaliana, 226.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:52783-53553:+ | gene-YEL051W_AKU4011 | rna-NM_001178866.1_AKU4011 | cds-NP_010863.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000075.1:26963-27733:- | gene-YEL051W_BG1 | rna-NM_001178866.1_BG1 | cds-NP_010863.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:56302-57072:+ | gene-YEL051W_Bruggeman | rna-NM_001178866.1_Bruggeman | cds-NP_010863.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:54725-55495:+ | gene-YEL051W_CAT1 | rna-NM_001178866.1_CAT1 | cds-NP_010863.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:52729-53499:+ | gene-YEL051W_CBS1585 | rna-NM_001178866.1_CBS1585 | cds-NP_010863.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:53788-54558:+ | gene-YEL051W_CBS436 | rna-NM_001178866.1_CBS436 | cds-NP_010863.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:52980-53750:+ | gene-YEL051W_CBS6412 | rna-NM_001178866.1_CBS6412 | cds-NP_010863.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:57624-58394:+ | gene-YEL051W_CBS6413 | rna-NM_001178866.1_CBS6413 | cds-NP_010863.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:56218-56988:+ | gene-YEL051W_CENPK1137D | rna-NM_001178866.1_CENPK1137D | cds-NP_010863.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:52540-53310:+ | gene-YEL051W_EthanolRed | rna-NM_001178866.1_EthanolRed | cds-NP_010863.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:52803-53573:+ | gene-YEL051W_FaliES1 | rna-NM_001178866.1_FaliES1 | cds-NP_010863.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000427.1:4482-5252:- | gene-YEL051W_JAY291 | rna-NM_001178866.1_JAY291 | cds-NP_010863.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:56734-57504:+ | gene-YEL051W_MUCL30387 | rna-NM_001178866.1_MUCL30387 | cds-NP_010863.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:52851-53621:+ | gene-YEL051W_MUCL30388 | rna-NM_001178866.1_MUCL30388 | cds-NP_010863.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:52097-52867:+ | gene-YEL051W_MUCL39482 | rna-NM_001178866.1_MUCL39482 | cds-NP_010863.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:56736-57506:+ | gene-YEL051W_MUCL42920 | rna-NM_001178866.1_MUCL42920 | cds-NP_010863.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:58377-59147:+ | gene-YEL051W_NCIM3186 | rna-NM_001178866.1_NCIM3186 | cds-NP_010863.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:57192-57962:+ | gene-YEL051W_NCYC1407 | rna-NM_001178866.1_NCYC1407 | cds-NP_010863.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:61204-61974:+ | gene-YEL051W_PE2H3 | rna-NM_001178866.1_PE2H3 | cds-NP_010863.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:57120-57890:+ | gene-YEL051W_PE2H4 | rna-NM_001178866.1_PE2H4 | cds-NP_010863.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:58378-59148:+ | gene-YEL051W_S288C | rna-NM_001178866.1_S288C | cds-NP_010863.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000053.1:27851-28621:- | gene-YEL051W_SA1 | rna-NM_001178866.1_SA1 | cds-NP_010863.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:53203-53973:+ | gene-YEL051W_ThermosaccDry | rna-NM_001178866.1_ThermosaccDry | cds-NP_010863.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:52411-53181:+ | gene-YEL051W_VR1 | rna-NM_001178866.1_VR1 | cds-NP_010863.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:52139-52909:+ | gene-YEL051W_ZTW1 | rna-NM_001178866.1_ZTW1 | cds-NP_010863.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:56390-57163:+ | gene-YEL051W_Sparadoxus | rna-NM_001178866.1_Sparadoxus | cds-NP_010863.1_Sparadoxus | 95.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |