Gene name: VMA7
Reference locus (S288C): YGR020C
Gene biotype: protein_coding
Description: Subunit F of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane; the V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) has eight subunits
Top 10 interactors (score): VMA4 (0.999); VMA3 (0.999); VMA5 (0.999); VMA2 (0.999); VMA8 (0.999); VMA16 (0.999); VMA10 (0.999); STV1 (0.999); VMA11 (0.999); VMA13 (0.999); VPH1 (0.999); VMA6 (0.999); VMA1 (0.999); VMA9 (0.985); ATP1 (0.959); ATP3 (0.933); ATP15 (0.932); ATP5 (0.928); ATP7 (0.921); ATP16 (0.921)
Homologues (species, bitscore): ATP6V1F (Homo sapiens, 105.1); Atp6v1f (Mus musculus, 115.9); atp6v1f (Danio rerio, 110.5); atp6v1f (Xenopus tropicalis, 111.7); Vha14-1 (Drosophila melanogaster, 111.3); vha-9 (Caenorhabditis elegans, 120.2); AT4G02620 (Arabidopsis thaliana, 120.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:528816-529172:- | gene-YGR020C_AKU4011 | rna-NM_001181149.1_AKU4011 | cds-NP_011534.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:46738-47094:+ | gene-YGR020C_BG1 | rna-NM_001181149.1_BG1 | cds-NP_011534.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:529997-530353:- | gene-YGR020C_Bruggeman | rna-NM_001181149.1_Bruggeman | cds-NP_011534.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:528777-529133:- | gene-YGR020C_CAT1 | rna-NM_001181149.1_CAT1 | cds-NP_011534.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:530135-530491:- | gene-YGR020C_CBS1585 | rna-NM_001181149.1_CBS1585 | cds-NP_011534.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:524880-525236:- | gene-YGR020C_CBS436 | rna-NM_001181149.1_CBS436 | cds-NP_011534.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:522906-523262:- | gene-YGR020C_CBS6412 | rna-NM_001181149.1_CBS6412 | cds-NP_011534.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:526985-527341:- | gene-YGR020C_CBS6413 | rna-NM_001181149.1_CBS6413 | cds-NP_011534.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:526789-527145:- | gene-YGR020C_CENPK1137D | rna-NM_001181149.1_CENPK1137D | cds-NP_011534.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:517008-517364:- | gene-YGR020C_EthanolRed | rna-NM_001181149.1_EthanolRed | cds-NP_011534.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:520258-520614:- | gene-YGR020C_FaliES1 | rna-NM_001181149.1_FaliES1 | cds-NP_011534.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000020.1:59165-59521:- | gene-YGR020C_JAY291 | rna-NM_001181149.1_JAY291 | cds-NP_011534.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:527224-527580:- | gene-YGR020C_MUCL30387 | rna-NM_001181149.1_MUCL30387 | cds-NP_011534.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:529766-530122:- | gene-YGR020C_MUCL30388 | rna-NM_001181149.1_MUCL30388 | cds-NP_011534.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:525963-526319:- | gene-YGR020C_MUCL39482 | rna-NM_001181149.1_MUCL39482 | cds-NP_011534.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:535707-536063:- | gene-YGR020C_MUCL42920 | rna-NM_001181149.1_MUCL42920 | cds-NP_011534.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:526973-527329:- | gene-YGR020C_NCIM3186 | rna-NM_001181149.1_NCIM3186 | cds-NP_011534.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:520146-520502:- | gene-YGR020C_NCYC1407 | rna-NM_001181149.1_NCYC1407 | cds-NP_011534.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:523038-523394:- | gene-YGR020C_PE2H3 | rna-NM_001181149.1_PE2H3 | cds-NP_011534.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:528088-528444:- | gene-YGR020C_PE2H4 | rna-NM_001181149.1_PE2H4 | cds-NP_011534.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:526973-527329:- | gene-YGR020C_S288C | rna-NM_001181149.1_S288C | cds-NP_011534.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:28374-28730:+ | gene-YGR020C_SA1 | rna-NM_001181149.1_SA1 | cds-NP_011534.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:539583-539939:- | gene-YGR020C_ThermosaccDry | rna-NM_001181149.1_ThermosaccDry | cds-NP_011534.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:630256-630612:- | gene-YGR020C_VR1 | rna-NM_001181149.1_VR1 | cds-NP_011534.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:518510-518866:- | gene-YGR020C_ZTW1 | rna-NM_001181149.1_ZTW1 | cds-NP_011534.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:527895-528251:- | gene-YGR020C_Sparadoxus | rna-NM_001181149.1_Sparadoxus | cds-NP_011534.1_Sparadoxus | 93.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |