Gene name: VMA22
Reference locus (S288C): YHR060W
Gene biotype: protein_coding
Description: Coiled-coil domain-containing protein 115; Protein that is required for vacuolar H+-ATPase (V-ATPase) function; peripheral membrane protein; not an actual component of the V-ATPase complex; functions in the assembly of the V-ATPase; localized to the yeast endoplasmic reticulum (ER)
Top 10 interactors (score): VPH2 (0.996); VPH1 (0.971); VMA8 (0.912); VMA6 (0.898); VOA1 (0.897); VMA11 (0.81); VMA10 (0.81); VMA21 (0.806); VMA7 (0.797); STV1 (0.784); VMA5 (0.782); VMA4 (0.768); VMA13 (0.765); VMA3 (0.716); SHR3 (0.713); VMA2 (0.699); VMA16 (0.694); VMA1 (0.685); LOC1 (0.595); VFA1 (0.497)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:206984-207529:+ | gene-YHR060W_AKU4011 | rna-NM_001179190.1_AKU4011 | cds-NP_011927.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:128124-128669:+ | gene-YHR060W_BG1 | rna-NM_001179190.1_BG1 | cds-NP_011927.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:214742-215287:+ | gene-YHR060W_Bruggeman | rna-NM_001179190.1_Bruggeman | cds-NP_011927.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:209530-210075:+ | gene-YHR060W_CAT1 | rna-NM_001179190.1_CAT1 | cds-NP_011927.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:206090-206635:+ | gene-YHR060W_CBS1585 | rna-NM_001179190.1_CBS1585 | cds-NP_011927.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:204047-204592:+ | gene-YHR060W_CBS436 | rna-NM_001179190.1_CBS436 | cds-NP_011927.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:206322-206867:+ | gene-YHR060W_CBS6412 | rna-NM_001179190.1_CBS6412 | cds-NP_011927.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:207154-207699:+ | gene-YHR060W_CBS6413 | rna-NM_001179190.1_CBS6413 | cds-NP_011927.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:213888-214433:+ | gene-YHR060W_CENPK1137D | rna-NM_001179190.1_CENPK1137D | cds-NP_011927.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:206481-207026:+ | gene-YHR060W_EthanolRed | rna-NM_001179190.1_EthanolRed | cds-NP_011927.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:207458-208003:+ | gene-YHR060W_FaliES1 | rna-NM_001179190.1_FaliES1 | cds-NP_011927.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000280.1:9305-9850:- | gene-YHR060W_JAY291 | rna-NM_001179190.1_JAY291 | cds-NP_011927.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:214494-215039:+ | gene-YHR060W_MUCL30387 | rna-NM_001179190.1_MUCL30387 | cds-NP_011927.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:214376-214921:+ | gene-YHR060W_MUCL30388 | rna-NM_001179190.1_MUCL30388 | cds-NP_011927.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:206375-206920:+ | gene-YHR060W_MUCL39482 | rna-NM_001179190.1_MUCL39482 | cds-NP_011927.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:213281-213826:+ | gene-YHR060W_MUCL42920 | rna-NM_001179190.1_MUCL42920 | cds-NP_011927.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:220607-221152:+ | gene-YHR060W_NCIM3186 | rna-NM_001179190.1_NCIM3186 | cds-NP_011927.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:678016-678561:+ | gene-YHR060W_NCYC1407 | rna-NM_001179190.1_NCYC1407 | cds-NP_011927.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:208578-209123:+ | gene-YHR060W_PE2H3 | rna-NM_001179190.1_PE2H3 | cds-NP_011927.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:216025-216570:+ | gene-YHR060W_PE2H4 | rna-NM_001179190.1_PE2H4 | cds-NP_011927.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:220725-221270:+ | gene-YHR060W_S288C | rna-NM_001179190.1_S288C | cds-NP_011927.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:138171-138716:- | gene-YHR060W_SA1 | rna-NM_001179190.1_SA1 | cds-NP_011927.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:208549-209094:+ | gene-YHR060W_ThermosaccDry | rna-NM_001179190.1_ThermosaccDry | cds-NP_011927.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:216188-216733:+ | gene-YHR060W_VR1 | rna-NM_001179190.1_VR1 | cds-NP_011927.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:200102-200647:+ | gene-YHR060W_ZTW1 | rna-NM_001179190.1_ZTW1 | cds-NP_011927.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:205647-206192:+ | gene-YHR060W_Sparadoxus | rna-NM_001179190.1_Sparadoxus | cds-NP_011927.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |