Gene name: VMA16
Reference locus (S288C): YHR026W
Gene biotype: protein_coding
Description: Subunit c'' of the vacuolar ATPase; v-ATPase functions in acidification of the vacuole; one of three proteolipid subunits of the V0 domain
Top 10 interactors (score): VPH1 (0.999); VMA7 (0.999); STV1 (0.999); VMA13 (0.999); VMA1 (0.999); VMA3 (0.999); VMA10 (0.999); VMA4 (0.999); VMA2 (0.999); VMA8 (0.999); VMA5 (0.999); VMA6 (0.999); VMA11 (0.998); ATP1 (0.994); VMA9 (0.989); IPP1 (0.988); ATP3 (0.986); ATP6 (0.986); ATP5 (0.986); ATP16 (0.984)
Homologues (species, bitscore): ATP6V0B (Homo sapiens, 188.7); Atp6v0b (Mus musculus, 189.5); atp6v0b (Danio rerio, 190.7); atp6v0b (Xenopus tropicalis, 189.9); VhaPPA1-1 (Drosophila melanogaster, 199.1); vha-4 (Caenorhabditis elegans, 197.2); AT2G25610 (Arabidopsis thaliana, 195.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:149042-149683:+ | gene-YHR026W_AKU4011 | rna-NM_001179156.1_AKU4011 | cds-NP_011891.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:69328-69969:+ | gene-YHR026W_BG1 | rna-NM_001179156.1_BG1 | cds-NP_011891.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:156566-157207:+ | gene-YHR026W_Bruggeman | rna-NM_001179156.1_Bruggeman | cds-NP_011891.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:150947-151588:+ | gene-YHR026W_CAT1 | rna-NM_001179156.1_CAT1 | cds-NP_011891.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:149374-150015:+ | gene-YHR026W_CBS1585 | rna-NM_001179156.1_CBS1585 | cds-NP_011891.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:143719-144360:+ | gene-YHR026W_CBS436 | rna-NM_001179156.1_CBS436 | cds-NP_011891.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:149066-149707:+ | gene-YHR026W_CBS6412 | rna-NM_001179156.1_CBS6412 | cds-NP_011891.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:149198-149839:+ | gene-YHR026W_CBS6413 | rna-NM_001179156.1_CBS6413 | cds-NP_011891.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:154113-154754:+ | gene-YHR026W_CENPK1137D | rna-NM_001179156.1_CENPK1137D | cds-NP_011891.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:148587-149228:+ | gene-YHR026W_EthanolRed | rna-NM_001179156.1_EthanolRed | cds-NP_011891.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:149566-150207:+ | gene-YHR026W_FaliES1 | rna-NM_001179156.1_FaliES1 | cds-NP_011891.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000273.1:31400-32041:- | gene-YHR026W_JAY291 | rna-NM_001179156.1_JAY291 | cds-NP_011891.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:155635-156276:+ | gene-YHR026W_MUCL30387 | rna-NM_001179156.1_MUCL30387 | cds-NP_011891.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:156107-156748:+ | gene-YHR026W_MUCL30388 | rna-NM_001179156.1_MUCL30388 | cds-NP_011891.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:148401-149042:+ | gene-YHR026W_MUCL39482 | rna-NM_001179156.1_MUCL39482 | cds-NP_011891.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:155178-155819:+ | gene-YHR026W_MUCL42920 | rna-NM_001179156.1_MUCL42920 | cds-NP_011891.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:160726-161367:+ | gene-YHR026W_NCIM3186 | rna-NM_001179156.1_NCIM3186 | cds-NP_011891.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:148313-148954:+ | gene-YHR026W_NCYC1407 | rna-NM_001179156.1_NCYC1407 | cds-NP_011891.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:150724-151365:+ | gene-YHR026W_PE2H3 | rna-NM_001179156.1_PE2H3 | cds-NP_011891.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:158165-158806:+ | gene-YHR026W_PE2H4 | rna-NM_001179156.1_PE2H4 | cds-NP_011891.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:160844-161485:+ | gene-YHR026W_S288C | rna-NM_001179156.1_S288C | cds-NP_011891.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000106.1:14389-15030:+ | gene-YHR026W_SA1 | rna-NM_001179156.1_SA1 | cds-NP_011891.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:150655-151296:+ | gene-YHR026W_ThermosaccDry | rna-NM_001179156.1_ThermosaccDry | cds-NP_011891.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:157195-157836:+ | gene-YHR026W_VR1 | rna-NM_001179156.1_VR1 | cds-NP_011891.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:142246-142887:+ | gene-YHR026W_ZTW1 | rna-NM_001179156.1_ZTW1 | cds-NP_011891.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:148371-149012:+ | gene-YHR026W_Sparadoxus | rna-NM_001179156.1_Sparadoxus | cds-NP_011891.1_Sparadoxus | 96.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |