Gene name: VLD1
Reference locus (S288C): YIR014W
Gene biotype: protein_coding
Description: Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; YIR014W is a non-essential gene
Top 10 interactors (score): YPR109W (0.813); BSC6 (0.747); LAA1 (0.718); SBE2 (0.712); EFM6 (0.698); TRE2 (0.697); FMP46 (0.692); SPC2 (0.671); PRM10 (0.655); TRE1 (0.65); TUL1 (0.641); SRP102 (0.618); EGD2 (0.611); PMP3 (0.61); TED1 (0.574); LSB6 (0.568); LIP1 (0.567); APL3 (0.561); APL4 (0.525); LSB1 (0.52)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:380427-381155:+ | gene-YIR014W_AKU4011 | rna-NM_001179536.3_AKU4011 | cds-NP_012279.4_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:45419-46147:- | gene-YIR014W_BG1 | rna-NM_001179536.3_BG1 | cds-NP_012279.4_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:384849-385577:+ | gene-YIR014W_Bruggeman | rna-NM_001179536.3_Bruggeman | cds-NP_012279.4_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:371559-372287:+ | gene-YIR014W_CAT1 | rna-NM_001179536.3_CAT1 | cds-NP_012279.4_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:380456-381184:+ | gene-YIR014W_CBS1585 | rna-NM_001179536.3_CBS1585 | cds-NP_012279.4_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:373130-373858:+ | gene-YIR014W_CBS436 | rna-NM_001179536.3_CBS436 | cds-NP_012279.4_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:375945-376673:+ | gene-YIR014W_CBS6412 | rna-NM_001179536.3_CBS6412 | cds-NP_012279.4_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:372537-373265:+ | gene-YIR014W_CBS6413 | rna-NM_001179536.3_CBS6413 | cds-NP_012279.4_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:373141-373869:+ | gene-YIR014W_CENPK1137D | rna-NM_001179536.3_CENPK1137D | cds-NP_012279.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:363509-364237:+ | gene-YIR014W_EthanolRed | rna-NM_001179536.3_EthanolRed | cds-NP_012279.4_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:382235-382963:+ | gene-YIR014W_FaliES1 | rna-NM_001179536.3_FaliES1 | cds-NP_012279.4_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000009.1:9001-9729:- | gene-YIR014W_JAY291 | rna-NM_001179536.3_JAY291 | cds-NP_012279.4_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:382092-382820:+ | gene-YIR014W_MUCL30387 | rna-NM_001179536.3_MUCL30387 | cds-NP_012279.4_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:378871-379599:+ | gene-YIR014W_MUCL30388 | rna-NM_001179536.3_MUCL30388 | cds-NP_012279.4_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:381096-381824:+ | gene-YIR014W_MUCL39482 | rna-NM_001179536.3_MUCL39482 | cds-NP_012279.4_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:384659-385387:+ | gene-YIR014W_MUCL42920 | rna-NM_001179536.3_MUCL42920 | cds-NP_012279.4_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:381086-381814:+ | gene-YIR014W_NCIM3186 | rna-NM_001179536.3_NCIM3186 | cds-NP_012279.4_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:385319-386047:+ | gene-YIR014W_NCYC1407 | rna-NM_001179536.3_NCYC1407 | cds-NP_012279.4_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:375143-375871:+ | gene-YIR014W_PE2H3 | rna-NM_001179536.3_PE2H3 | cds-NP_012279.4_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:369849-370577:+ | gene-YIR014W_PE2H4 | rna-NM_001179536.3_PE2H4 | cds-NP_012279.4_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:381086-381814:+ | gene-YIR014W_S288C | rna-NM_001179536.3_S288C | cds-NP_012279.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000066.1:55942-56670:+ | gene-YIR014W_SA1 | rna-NM_001179536.3_SA1 | cds-NP_012279.4_SA1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:379840-380568:+ | gene-YIR014W_ThermosaccDry | rna-NM_001179536.3_ThermosaccDry | cds-NP_012279.4_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:375920-376648:+ | gene-YIR014W_VR1 | rna-NM_001179536.3_VR1 | cds-NP_012279.4_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:353839-354567:+ | gene-YIR014W_ZTW1 | rna-NM_001179536.3_ZTW1 | cds-NP_012279.4_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:375240-375968:+ | gene-YIR014W_Sparadoxus | rna-NM_001179536.3_Sparadoxus | cds-NP_012279.4_Sparadoxus | 87.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |