Gene name: VIK1
Reference locus (S288C): YPL253C
Gene biotype: protein_coding
Description: Spindle pole body-associated protein VIK1; Protein that forms a kinesin-14 heterodimeric motor with Kar3p; localizes Kar3p at mitotic spindle poles; has a structure similar to a kinesin motor domain but lacks an ATP-binding site and is catalytically inactive; binds microtubules; required for sister chromatid cohesion; VIK1 has a paralog, CIK1, that arose from the whole genome duplication
Top 10 interactors (score): KAR3 (0.999); BIM1 (0.901); CTF8 (0.849); KIP3 (0.818); KIP1 (0.777); CIN8 (0.76); HCM1 (0.728); KIP2 (0.71); BIK1 (0.676); CTF19 (0.67); DCC1 (0.67); CTF18 (0.614); TUB2 (0.604); TUB1 (0.584); GIM3 (0.575); YND1 (0.572); CHL1 (0.568); CIK1 (0.568); SPC98 (0.562); BUB3 (0.537)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:48807-50750:- | gene-YPL253C_AKU4011 | rna-NM_001184067.1_AKU4011 | cds-NP_015070.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000184.1:24441-26384:+ | gene-YPL253C_BG1 | rna-NM_001184067.1_BG1 | cds-NP_015070.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:72696-74639:- | gene-YPL253C_Bruggeman | rna-NM_001184067.1_Bruggeman | cds-NP_015070.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:70818-72761:- | gene-YPL253C_CAT1 | rna-NM_001184067.1_CAT1 | cds-NP_015070.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:53117-55060:- | gene-YPL253C_CBS1585 | rna-NM_001184067.1_CBS1585 | cds-NP_015070.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:67554-69497:- | gene-YPL253C_CBS436 | rna-NM_001184067.1_CBS436 | cds-NP_015070.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:58282-60225:- | gene-YPL253C_CBS6412 | rna-NM_001184067.1_CBS6412 | cds-NP_015070.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:49269-51212:- | gene-YPL253C_CBS6413 | rna-NM_001184067.1_CBS6413 | cds-NP_015070.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:71001-72944:- | gene-YPL253C_CENPK1137D | rna-NM_001184067.1_CENPK1137D | cds-NP_015070.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:48219-50162:- | gene-YPL253C_EthanolRed | rna-NM_001184067.1_EthanolRed | cds-NP_015070.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:55026-56969:- | gene-YPL253C_FaliES1 | rna-NM_001184067.1_FaliES1 | cds-NP_015070.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000264.1:23781-25724:+ | gene-YPL253C_JAY291 | rna-NM_001184067.1_JAY291 | cds-NP_015070.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:65860-67803:- | gene-YPL253C_MUCL30387 | rna-NM_001184067.1_MUCL30387 | cds-NP_015070.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:64305-66248:- | gene-YPL253C_MUCL30388 | rna-NM_001184067.1_MUCL30388 | cds-NP_015070.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:46247-48190:- | gene-YPL253C_MUCL39482 | rna-NM_001184067.1_MUCL39482 | cds-NP_015070.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:65131-67074:- | gene-YPL253C_MUCL42920 | rna-NM_001184067.1_MUCL42920 | cds-NP_015070.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:71046-72989:- | gene-YPL253C_NCIM3186 | rna-NM_001184067.1_NCIM3186 | cds-NP_015070.1_NCIM3186 | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:52694-54637:- | gene-YPL253C_NCYC1407 | rna-NM_001184067.1_NCYC1407 | cds-NP_015070.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:60432-62375:- | gene-YPL253C_PE2H3 | rna-NM_001184067.1_PE2H3 | cds-NP_015070.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:60076-62019:- | gene-YPL253C_PE2H4 | rna-NM_001184067.1_PE2H4 | cds-NP_015070.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:71063-73006:- | gene-YPL253C_S288C | rna-NM_001184067.1_S288C | cds-NP_015070.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000056.1:12955-14898:- | gene-YPL253C_SA1 | rna-NM_001184067.1_SA1 | cds-NP_015070.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:55027-56970:- | gene-YPL253C_ThermosaccDry | rna-NM_001184067.1_ThermosaccDry | cds-NP_015070.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:294908-296851:- | gene-YPL253C_VR1 | rna-NM_001184067.1_VR1 | cds-NP_015070.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:54572-56515:- | gene-YPL253C_ZTW1 | rna-NM_001184067.1_ZTW1 | cds-NP_015070.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:56153-58096:- | gene-YPL253C_Sparadoxus | rna-NM_001184067.1_Sparadoxus | cds-NP_015070.1_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |