Gene name: VID27
Reference locus (S288C): YNL212W
Gene biotype: protein_coding
Description: Vacuolar import and degradation protein 27; Cytoplasmic protein of unknown function; possibly involved in vacuolar protein degradation; not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase); null mutants exhibit normal growth; contains two PH-like domains
Top 10 interactors (score): SPO71 (0.883); KRI1 (0.87); VPS13 (0.821); RQC1 (0.815); GYP7 (0.801); SIP3 (0.782); YPR097W (0.78); SFB3 (0.756); YML012C-A (0.755); YGR035C (0.755); RBH1 (0.749); RBH2 (0.718); SEG2 (0.712); YJL055W (0.698); EPO1 (0.678); TPH3 (0.675); ECM13 (0.671); EFR3 (0.659); AGE2 (0.646); YOR238W (0.638)
Homologues (species, bitscore): AT3G19240 (Arabidopsis thaliana, 93.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:241241-243589:+ | gene-YNL212W_AKU4011 | rna-NM_001183050.1_AKU4011 | cds-NP_014187.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:145186-147534:+ | gene-YNL212W_BG1 | rna-NM_001183050.1_BG1 | cds-NP_014187.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:251286-253634:+ | gene-YNL212W_Bruggeman | rna-NM_001183050.1_Bruggeman | cds-NP_014187.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:258440-260788:+ | gene-YNL212W_CAT1 | rna-NM_001183050.1_CAT1 | cds-NP_014187.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:241636-243984:+ | gene-YNL212W_CBS1585 | rna-NM_001183050.1_CBS1585 | cds-NP_014187.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:236717-239065:+ | gene-YNL212W_CBS436 | rna-NM_001183050.1_CBS436 | cds-NP_014187.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:237674-240022:+ | gene-YNL212W_CBS6412 | rna-NM_001183050.1_CBS6412 | cds-NP_014187.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:238320-240668:+ | gene-YNL212W_CBS6413 | rna-NM_001183050.1_CBS6413 | cds-NP_014187.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:241262-243610:+ | gene-YNL212W_CENPK1137D | rna-NM_001183050.1_CENPK1137D | cds-NP_014187.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:238878-241226:+ | gene-YNL212W_EthanolRed | rna-NM_001183050.1_EthanolRed | cds-NP_014187.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:233620-235968:+ | gene-YNL212W_FaliES1 | rna-NM_001183050.1_FaliES1 | cds-NP_014187.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000082.1:144779-147127:+ | gene-YNL212W_JAY291 | rna-NM_001183050.1_JAY291 | cds-NP_014187.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:246822-249170:+ | gene-YNL212W_MUCL30387 | rna-NM_001183050.1_MUCL30387 | cds-NP_014187.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:245403-247751:+ | gene-YNL212W_MUCL30388 | rna-NM_001183050.1_MUCL30388 | cds-NP_014187.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:239126-241474:+ | gene-YNL212W_MUCL39482 | rna-NM_001183050.1_MUCL39482 | cds-NP_014187.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:241384-243732:+ | gene-YNL212W_MUCL42920 | rna-NM_001183050.1_MUCL42920 | cds-NP_014187.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:247430-249778:+ | gene-YNL212W_NCIM3186 | rna-NM_001183050.1_NCIM3186 | cds-NP_014187.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:241216-243564:+ | gene-YNL212W_NCYC1407 | rna-NM_001183050.1_NCYC1407 | cds-NP_014187.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:238124-240472:+ | gene-YNL212W_PE2H3 | rna-NM_001183050.1_PE2H3 | cds-NP_014187.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:237512-239860:+ | gene-YNL212W_PE2H4 | rna-NM_001183050.1_PE2H4 | cds-NP_014187.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:247461-249809:+ | gene-YNL212W_S288C | rna-NM_001183050.1_S288C | cds-NP_014187.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000040.1:2500-4848:- | gene-YNL212W_SA1 | rna-NM_001183050.1_SA1 | cds-NP_014187.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:234476-236824:+ | gene-YNL212W_ThermosaccDry | rna-NM_001183050.1_ThermosaccDry | cds-NP_014187.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:253480-255828:+ | gene-YNL212W_VR1 | rna-NM_001183050.1_VR1 | cds-NP_014187.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:144807-147155:+ | gene-YNL212W_ZTW1 | rna-NM_001183050.1_ZTW1 | cds-NP_014187.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:244908-247256:+ | gene-YNL212W_Sparadoxus | rna-NM_001183050.1_Sparadoxus | cds-NP_014187.1_Sparadoxus | 90.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |