Gene name: VEL1
Reference locus (S288C): YGL258W
Gene biotype: protein_coding
Description: Protein of unknown function; highly induced in zinc-depleted conditions and has increased expression in NAP1 deletion mutants; VEL1 has a paralog, YOR387C, that arose from a single-locus duplication
Top 10 interactors (score): ADH4 (0.956); YOR387C (0.923); ZPS1 (0.798); YGL262W (0.766); RTC4 (0.759); YGL258W-A (0.745); MNT2 (0.711); ZAP1 (0.694); ZRT1 (0.626); GPG1 (0.612); YPS5 (0.612); YHK8 (0.573); PHM7 (0.571); ZRT2 (0.564); PPG1 (0.555); BRR6 (0.528); MTC3 (0.524); COS12 (0.499); COS10 (0.497); SNO1 (0.485)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:12374-13235:+ | gene-YGL258W_AKU4011 | rna-NM_001181124.1_AKU4011 | cds-NP_011256.1_AKU4011 | 68.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:4659-5279:+ | gene-YGL258W_BG1 | rna-NM_001181124.1_BG1 | cds-NP_011256.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:12475-13095:+ | gene-YGL258W_Bruggeman | rna-NM_001181124.1_Bruggeman | cds-NP_011256.1_Bruggeman | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:11047-11667:+ | gene-YGL258W_CAT1 | rna-NM_001181124.1_CAT1 | cds-NP_011256.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:16903-17523:+ | gene-YGL258W_CBS1585 | rna-NM_001181124.1_CBS1585 | cds-NP_011256.1_CBS1585 | 65.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:11636-12256:+ | gene-YGL258W_CBS436 | rna-NM_001181124.1_CBS436 | cds-NP_011256.1_CBS436 | 97.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:4471-5091:+ | gene-YGL258W_CBS6412 | rna-NM_001181124.1_CBS6412 | cds-NP_011256.1_CBS6412 | 94.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:10758-11378:+ | gene-YGL258W_CBS6413 | rna-NM_001181124.1_CBS6413 | cds-NP_011256.1_CBS6413 | 94.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:10755-11375:+ | gene-YGL258W_CENPK1137D | rna-NM_001181124.1_CENPK1137D | cds-NP_011256.1_CENPK1137D | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:3891-4511:+ | gene-YGL258W_EthanolRed | rna-NM_001181124.1_EthanolRed | cds-NP_011256.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:4252-4872:+ | gene-YGL258W_FaliES1 | rna-NM_001181124.1_FaliES1 | cds-NP_011256.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000079.1:62184-62804:- | gene-YGL258W_JAY291 | rna-NM_001181124.1_JAY291 | cds-NP_011256.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:12659-13279:+ | gene-YGL258W_MUCL30387 | rna-NM_001181124.1_MUCL30387 | cds-NP_011256.1_MUCL30387 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000259.1:2025-2645:+ | gene-YGL258W_MUCL30388 | rna-NM_001181124.1_MUCL30388 | cds-NP_011256.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:13251-14120:+ | gene-YGL258W_MUCL39482 | rna-NM_001181124.1_MUCL39482 | cds-NP_011256.1_MUCL39482 | 67.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:14045-14665:+ | gene-YGL258W_MUCL42920 | rna-NM_001181124.1_MUCL42920 | cds-NP_011256.1_MUCL42920 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:11110-11730:+ | gene-YGL258W_NCIM3186 | rna-NM_001181124.1_NCIM3186 | cds-NP_011256.1_NCIM3186 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:5215-5883:+ | gene-YGL258W_NCYC1407 | rna-NM_001181124.1_NCYC1407 | cds-NP_011256.1_NCYC1407 | 89.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:7127-7747:+ | gene-YGL258W_PE2H3 | rna-NM_001181124.1_PE2H3 | cds-NP_011256.1_PE2H3 | 93.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:6675-7295:+ | gene-YGL258W_PE2H4 | rna-NM_001181124.1_PE2H4 | cds-NP_011256.1_PE2H4 | 93.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:11110-11730:+ | gene-YGL258W_S288C | rna-NM_001181124.1_S288C | cds-NP_011256.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:363619-364239:- | gene-YGL258W_SA1 | rna-NM_001181124.1_SA1 | cds-NP_011256.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:4567-5187:+ | gene-YGL258W_ThermosaccDry | rna-NM_001181124.1_ThermosaccDry | cds-NP_011256.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:4578-5198:+ | gene-YGL258W_VR1 | rna-NM_001181124.1_VR1 | cds-NP_011256.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:3613-4233:+ | gene-YGL258W_ZTW1 | rna-NM_001181124.1_ZTW1 | cds-NP_011256.1_ZTW1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:1044495-1045115:- | gene-YGL258W_Sparadoxus | rna-NM_001181124.1_Sparadoxus | cds-NP_011256.1_Sparadoxus | 90.2 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |