Gene name: VBA5
Reference locus (S288C): YKR105C
Gene biotype: protein_coding
Description: Vacuolar basic amino acid transporter 5; Plasma membrane protein of the Major Facilitator Superfamily (MFS); involved in amino acid uptake and drug sensitivity; VBA5 has a paralog, VBA3, that arose from a segmental duplication
Top 10 interactors (score): YGR259C (0.892); YMR279C (0.875); YNR063W (0.861); YER134C (0.848); AMF1 (0.815); GEX2 (0.802); DOS2 (0.779); ATR1 (0.768); GEX1 (0.738); VBA4 (0.736); CIS3 (0.646); AVT6 (0.618); YOR292C (0.617); OR26.14 (0.572); YPQ1 (0.57); RTC2 (0.563); BAP3 (0.563); RUP1 (0.481); ARN2 (0.476); GNP1 (0.464)
Homologues (species, bitscore): mfsd9 (Danio rerio, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:9708-11460:+ | gene-YKR105C_CAT1 | rna-NM_001179895.3_CAT1 | cds-NP_013031.3_CAT1 | 98.2 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:640290-641670:- | gene-YKR105C_CBS6412 | rna-NM_001179895.3_CBS6412 | cds-NP_013031.3_CBS6412 | 78.3 | 78.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:9039-10787:+ | gene-YKR105C_EthanolRed | rna-NM_001179895.3_EthanolRed | cds-NP_013031.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:9058-10806:+ | gene-YKR105C_FaliES1 | rna-NM_001179895.3_FaliES1 | cds-NP_013031.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:10886-12638:+ | gene-YKR105C_MUCL39482 | rna-NM_001179895.3_MUCL39482 | cds-NP_013031.3_MUCL39482 | 97.3 | 99.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:9144-10892:+ | gene-YKR105C_PE2H4 | rna-NM_001179895.3_PE2H4 | cds-NP_013031.3_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:658716-660464:- | gene-YKR105C_S288C | rna-NM_001179895.3_S288C | cds-NP_013031.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:654080-655828:- | gene-YKR105C_ZTW1 | rna-NM_001179895.3_ZTW1 | cds-NP_013031.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:38549-40297:+ | gene-YKR105C_Sparadoxus | rna-NM_001179895.3_Sparadoxus | cds-NP_013031.3_Sparadoxus | 89.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |