Gene name: VAN1
Reference locus (S288C): YML115C
Gene biotype: protein_coding
Description: Component of the mannan polymerase I; complex contains Van1p and Mnn9p and is involved in the first steps of mannan synthesis; mutants are vanadate-resistant
Top 10 interactors (score): HOC1 (0.985); OCH1 (0.983); MNN9 (0.975); MNN11 (0.97); MNN10 (0.961); PMT2 (0.904); PMT4 (0.887); ANP1 (0.817); KRE2 (0.813); PMT5 (0.78); MNN2 (0.763); MNN5 (0.749); PMT1 (0.748); KTR6 (0.748); VRG4 (0.748); MNN1 (0.748); PMT3 (0.746); PBN1 (0.743); GPI18 (0.738); GPI14 (0.732)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:33887-35494:- | gene-YML115C_AKU4011 | rna-NM_001182477.1_AKU4011 | cds-NP_013592.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:440676-442283:+ | gene-YML115C_BG1 | rna-NM_001182477.1_BG1 | cds-NP_013592.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:40149-41756:- | gene-YML115C_Bruggeman | rna-NM_001182477.1_Bruggeman | cds-NP_013592.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:41708-43315:- | gene-YML115C_CAT1 | rna-NM_001182477.1_CAT1 | cds-NP_013592.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:33886-35493:- | gene-YML115C_CBS1585 | rna-NM_001182477.1_CBS1585 | cds-NP_013592.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:39906-41513:- | gene-YML115C_CBS436 | rna-NM_001182477.1_CBS436 | cds-NP_013592.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:34649-36256:- | gene-YML115C_CBS6412 | rna-NM_001182477.1_CBS6412 | cds-NP_013592.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:33113-34720:- | gene-YML115C_CBS6413 | rna-NM_001182477.1_CBS6413 | cds-NP_013592.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:34702-36309:- | gene-YML115C_CENPK1137D | rna-NM_001182477.1_CENPK1137D | cds-NP_013592.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:34402-36009:- | gene-YML115C_EthanolRed | rna-NM_001182477.1_EthanolRed | cds-NP_013592.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:34679-36286:- | gene-YML115C_FaliES1 | rna-NM_001182477.1_FaliES1 | cds-NP_013592.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:53899-55506:+ | gene-YML115C_JAY291 | rna-NM_001182477.1_JAY291 | cds-NP_013592.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:38627-40234:- | gene-YML115C_MUCL30387 | rna-NM_001182477.1_MUCL30387 | cds-NP_013592.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:41843-43450:- | gene-YML115C_MUCL30388 | rna-NM_001182477.1_MUCL30388 | cds-NP_013592.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:33901-35508:- | gene-YML115C_MUCL39482 | rna-NM_001182477.1_MUCL39482 | cds-NP_013592.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:38069-39676:- | gene-YML115C_MUCL42920 | rna-NM_001182477.1_MUCL42920 | cds-NP_013592.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:40141-41748:- | gene-YML115C_NCIM3186 | rna-NM_001182477.1_NCIM3186 | cds-NP_013592.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:34696-36303:- | gene-YML115C_NCYC1407 | rna-NM_001182477.1_NCYC1407 | cds-NP_013592.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:40136-41743:- | gene-YML115C_PE2H3 | rna-NM_001182477.1_PE2H3 | cds-NP_013592.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:40074-41681:- | gene-YML115C_PE2H4 | rna-NM_001182477.1_PE2H4 | cds-NP_013592.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:40187-41794:- | gene-YML115C_S288C | rna-NM_001182477.1_S288C | cds-NP_013592.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:32133-33740:- | gene-YML115C_SA1 | rna-NM_001182477.1_SA1 | cds-NP_013592.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:33977-35584:- | gene-YML115C_ThermosaccDry | rna-NM_001182477.1_ThermosaccDry | cds-NP_013592.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:38378-39985:- | gene-YML115C_VR1 | rna-NM_001182477.1_VR1 | cds-NP_013592.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:13459-15066:- | gene-YML115C_ZTW1 | rna-NM_001182477.1_ZTW1 | cds-NP_013592.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:45001-46608:- | gene-YML115C_Sparadoxus | rna-NM_001182477.1_Sparadoxus | cds-NP_013592.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |