Gene name: VAM10
Reference locus (S288C): YOR068C
Gene biotype: protein_coding
Description: Vacuolar morphogenesis protein 10; Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering
Top 10 interactors (score): AUA1 (0.712); ADF1 (0.71); IMO32 (0.695); NAG1 (0.692); PRP38 (0.617); HUR1 (0.617); VPS5 (0.617); EMI1 (0.616); YKL075C (0.612); BUD25 (0.61); RSM7 (0.574); WWM1 (0.573); TAD3 (0.573); YBR099C (0.563); HEM14 (0.562); SWF1 (0.561); NKP2 (0.561); SET6 (0.53); FYV5 (0.526); EAF1 (0.525)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:438203-438547:- | gene-YOR068C_AKU4011 | rna-NM_001183487.1_AKU4011 | cds-NP_014711.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:141154-141498:+ | gene-YOR068C_BG1 | rna-NM_001183487.1_BG1 | cds-NP_014711.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:440917-441261:- | gene-YOR068C_Bruggeman | rna-NM_001183487.1_Bruggeman | cds-NP_014711.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:439673-440017:- | gene-YOR068C_CAT1 | rna-NM_001183487.1_CAT1 | cds-NP_014711.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:432923-433267:- | gene-YOR068C_CBS1585 | rna-NM_001183487.1_CBS1585 | cds-NP_014711.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:437201-437545:- | gene-YOR068C_CBS436 | rna-NM_001183487.1_CBS436 | cds-NP_014711.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:432213-432557:- | gene-YOR068C_CBS6412 | rna-NM_001183487.1_CBS6412 | cds-NP_014711.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:439530-439874:- | gene-YOR068C_CBS6413 | rna-NM_001183487.1_CBS6413 | cds-NP_014711.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:453851-454195:- | gene-YOR068C_CENPK1137D | rna-NM_001183487.1_CENPK1137D | cds-NP_014711.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:434915-435259:- | gene-YOR068C_EthanolRed | rna-NM_001183487.1_EthanolRed | cds-NP_014711.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:438244-438588:- | gene-YOR068C_FaliES1 | rna-NM_001183487.1_FaliES1 | cds-NP_014711.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000407.1:5769-6113:+ | gene-YOR068C_JAY291 | rna-NM_001183487.1_JAY291 | cds-NP_014711.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:445699-446043:- | gene-YOR068C_MUCL30387 | rna-NM_001183487.1_MUCL30387 | cds-NP_014711.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:450109-450453:- | gene-YOR068C_MUCL30388 | rna-NM_001183487.1_MUCL30388 | cds-NP_014711.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:440391-440735:- | gene-YOR068C_MUCL39482 | rna-NM_001183487.1_MUCL39482 | cds-NP_014711.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:455522-455866:- | gene-YOR068C_MUCL42920 | rna-NM_001183487.1_MUCL42920 | cds-NP_014711.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:453758-454102:- | gene-YOR068C_NCIM3186 | rna-NM_001183487.1_NCIM3186 | cds-NP_014711.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:447309-447653:- | gene-YOR068C_NCYC1407 | rna-NM_001183487.1_NCYC1407 | cds-NP_014711.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:445902-446246:- | gene-YOR068C_PE2H3 | rna-NM_001183487.1_PE2H3 | cds-NP_014711.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:456283-456627:- | gene-YOR068C_PE2H4 | rna-NM_001183487.1_PE2H4 | cds-NP_014711.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:453869-454213:- | gene-YOR068C_S288C | rna-NM_001183487.1_S288C | cds-NP_014711.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000091.1:33433-33777:+ | gene-YOR068C_SA1 | rna-NM_001183487.1_SA1 | cds-NP_014711.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:437400-437744:- | gene-YOR068C_ThermosaccDry | rna-NM_001183487.1_ThermosaccDry | cds-NP_014711.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:438639-438983:- | gene-YOR068C_VR1 | rna-NM_001183487.1_VR1 | cds-NP_014711.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:171400-171744:- | gene-YOR068C_ZTW1 | rna-NM_001183487.1_ZTW1 | cds-NP_014711.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |