Gene name: VAC7
Reference locus (S288C): YNL054W
Gene biotype: protein_coding
Description: Integral vacuolar membrane protein; involved in vacuole inheritance and morphology; activates Fab1p kinase activity under basal conditions and also after hyperosmotic shock
Top 10 interactors (score): VAC14 (0.997); FIG4 (0.997); FAB1 (0.997); ATG18 (0.994); VPS34 (0.926); VPS30 (0.909); VPS15 (0.906); ATG38 (0.904); VPS38 (0.902); ATG14 (0.9); PEP7 (0.617); SAC1 (0.569); ATP14 (0.566); YVC1 (0.525); VAC8 (0.513); COX5A (0.482); VAM3 (0.478); YCK3 (0.465); CHM7 (0.451); EMP46 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:513862-517383:+ | gene-YNL054W_AKU4011 | rna-NM_001182893.3_AKU4011 | cds-NP_014344.3_AKU4011 | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:417849-421343:+ | gene-YNL054W_BG1 | rna-NM_001182893.3_BG1 | cds-NP_014344.3_BG1 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:530973-534494:+ | gene-YNL054W_Bruggeman | rna-NM_001182893.3_Bruggeman | cds-NP_014344.3_Bruggeman | 99.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:567561-571055:+ | gene-YNL054W_CAT1 | rna-NM_001182893.3_CAT1 | cds-NP_014344.3_CAT1 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:514532-518053:+ | gene-YNL054W_CBS1585 | rna-NM_001182893.3_CBS1585 | cds-NP_014344.3_CBS1585 | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:582809-586303:+ | gene-YNL054W_CBS436 | rna-NM_001182893.3_CBS436 | cds-NP_014344.3_CBS436 | 99.6 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:509625-513146:+ | gene-YNL054W_CBS6412 | rna-NM_001182893.3_CBS6412 | cds-NP_014344.3_CBS6412 | 98.3 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:510943-514464:+ | gene-YNL054W_CBS6413 | rna-NM_001182893.3_CBS6413 | cds-NP_014344.3_CBS6413 | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:519672-523169:+ | gene-YNL054W_CENPK1137D | rna-NM_001182893.3_CENPK1137D | cds-NP_014344.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:516685-520206:+ | gene-YNL054W_EthanolRed | rna-NM_001182893.3_EthanolRed | cds-NP_014344.3_EthanolRed | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:507210-510731:+ | gene-YNL054W_FaliES1 | rna-NM_001182893.3_FaliES1 | cds-NP_014344.3_FaliES1 | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000040.1:22280-25774:+ | gene-YNL054W_JAY291 | rna-NM_001182893.3_JAY291 | cds-NP_014344.3_JAY291 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:527307-530828:+ | gene-YNL054W_MUCL30387 | rna-NM_001182893.3_MUCL30387 | cds-NP_014344.3_MUCL30387 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:556727-560248:+ | gene-YNL054W_MUCL30388 | rna-NM_001182893.3_MUCL30388 | cds-NP_014344.3_MUCL30388 | 99.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:511948-515469:+ | gene-YNL054W_MUCL39482 | rna-NM_001182893.3_MUCL39482 | cds-NP_014344.3_MUCL39482 | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:516077-519541:+ | gene-YNL054W_MUCL42920 | rna-NM_001182893.3_MUCL42920 | cds-NP_014344.3_MUCL42920 | 98.9 | 99.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:526055-529552:+ | gene-YNL054W_NCIM3186 | rna-NM_001182893.3_NCIM3186 | cds-NP_014344.3_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:514000-517521:+ | gene-YNL054W_NCYC1407 | rna-NM_001182893.3_NCYC1407 | cds-NP_014344.3_NCYC1407 | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:517196-520690:+ | gene-YNL054W_PE2H3 | rna-NM_001182893.3_PE2H3 | cds-NP_014344.3_PE2H3 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:512271-515765:+ | gene-YNL054W_PE2H4 | rna-NM_001182893.3_PE2H4 | cds-NP_014344.3_PE2H4 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:526086-529583:+ | gene-YNL054W_S288C | rna-NM_001182893.3_S288C | cds-NP_014344.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:105120-108614:+ | gene-YNL054W_SA1 | rna-NM_001182893.3_SA1 | cds-NP_014344.3_SA1 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:508085-511606:+ | gene-YNL054W_ThermosaccDry | rna-NM_001182893.3_ThermosaccDry | cds-NP_014344.3_ThermosaccDry | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:527157-530651:+ | gene-YNL054W_VR1 | rna-NM_001182893.3_VR1 | cds-NP_014344.3_VR1 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:417405-420926:+ | gene-YNL054W_ZTW1 | rna-NM_001182893.3_ZTW1 | cds-NP_014344.3_ZTW1 | 98.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:523315-526884:+ | gene-YNL054W_Sparadoxus | rna-NM_001182893.3_Sparadoxus | cds-NP_014344.3_Sparadoxus | 87.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |