Gene name: UTP7
Reference locus (S288C): YER082C
Gene biotype: protein_coding
Description: U3 small nucleolar RNA-associated protein 7; Nucleolar protein; component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA
Top 10 interactors (score): ENP1 (0.999); UTP11 (0.999); UTP4 (0.999); UTP6 (0.999); BMS1 (0.999); RRP5 (0.999); BFR2 (0.999); DIM1 (0.999); BUD21 (0.999); FCF1 (0.999); KRR1 (0.999); RRP7 (0.999); SAS10 (0.999); MPP10 (0.999); KRE33 (0.999); UTP22 (0.999); SOF1 (0.999); CKA1 (0.999); EMG1 (0.999); ECM16 (0.999)
Homologues (species, bitscore): WDR46 (Homo sapiens, 373.6); Wdr46 (Mus musculus, 373.2); ENSDARP00000122824 (Danio rerio, 62.4); wdr46 (Xenopus tropicalis, 365.5); CG2260 (Drosophila melanogaster, 304.7); wdr-46 (Caenorhabditis elegans, 351.7); AT3G10530 (Arabidopsis thaliana, 347.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:318050-319714:- | gene-YER082C_AKU4011 | rna-NM_001178973.1_AKU4011 | cds-NP_011005.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:106087-107751:+ | gene-YER082C_BG1 | rna-NM_001178973.1_BG1 | cds-NP_011005.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:327643-329307:- | gene-YER082C_Bruggeman | rna-NM_001178973.1_Bruggeman | cds-NP_011005.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:321994-323658:- | gene-YER082C_CAT1 | rna-NM_001178973.1_CAT1 | cds-NP_011005.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:317915-319579:- | gene-YER082C_CBS1585 | rna-NM_001178973.1_CBS1585 | cds-NP_011005.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:320054-321718:- | gene-YER082C_CBS436 | rna-NM_001178973.1_CBS436 | cds-NP_011005.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:317372-319036:- | gene-YER082C_CBS6412 | rna-NM_001178973.1_CBS6412 | cds-NP_011005.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:323362-325026:- | gene-YER082C_CBS6413 | rna-NM_001178973.1_CBS6413 | cds-NP_011005.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:322182-323846:- | gene-YER082C_CENPK1137D | rna-NM_001178973.1_CENPK1137D | cds-NP_011005.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:318394-320058:- | gene-YER082C_EthanolRed | rna-NM_001178973.1_EthanolRed | cds-NP_011005.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:318839-320503:- | gene-YER082C_FaliES1 | rna-NM_001178973.1_FaliES1 | cds-NP_011005.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000153.1:33895-35559:- | gene-YER082C_JAY291 | rna-NM_001178973.1_JAY291 | cds-NP_011005.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:323038-324702:- | gene-YER082C_MUCL30387 | rna-NM_001178973.1_MUCL30387 | cds-NP_011005.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:318709-320373:- | gene-YER082C_MUCL30388 | rna-NM_001178973.1_MUCL30388 | cds-NP_011005.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:316939-318603:- | gene-YER082C_MUCL39482 | rna-NM_001178973.1_MUCL39482 | cds-NP_011005.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:324180-325844:- | gene-YER082C_MUCL42920 | rna-NM_001178973.1_MUCL42920 | cds-NP_011005.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:324271-325935:- | gene-YER082C_NCIM3186 | rna-NM_001178973.1_NCIM3186 | cds-NP_011005.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:322003-323667:- | gene-YER082C_NCYC1407 | rna-NM_001178973.1_NCYC1407 | cds-NP_011005.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:332649-334313:- | gene-YER082C_PE2H3 | rna-NM_001178973.1_PE2H3 | cds-NP_011005.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:322590-324254:- | gene-YER082C_PE2H4 | rna-NM_001178973.1_PE2H4 | cds-NP_011005.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:324272-325936:- | gene-YER082C_S288C | rna-NM_001178973.1_S288C | cds-NP_011005.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000023.1:33901-35565:- | gene-YER082C_SA1 | rna-NM_001178973.1_SA1 | cds-NP_011005.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:319636-321300:- | gene-YER082C_ThermosaccDry | rna-NM_001178973.1_ThermosaccDry | cds-NP_011005.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:320329-321993:- | gene-YER082C_VR1 | rna-NM_001178973.1_VR1 | cds-NP_011005.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:316797-318461:- | gene-YER082C_ZTW1 | rna-NM_001178973.1_ZTW1 | cds-NP_011005.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:320202-321863:- | gene-YER082C_Sparadoxus | rna-NM_001178973.1_Sparadoxus | cds-NP_011005.1_Sparadoxus | 90.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |