Gene name: UTP22
Reference locus (S288C): YGR090W
Gene biotype: protein_coding
Description: U3 small nucleolar RNA-associated protein 22; Component of the small-subunit processome; required for nuclear export of tRNAs; may facilitate binding of Utp8p to aminoacylated tRNAs and their delivery to Los1p for export; conserved from yeast to mammals
Top 10 interactors (score): ENP2 (0.999); UTP10 (0.999); UTP14 (0.999); PWP2 (0.999); UTP21 (0.999); UTP20 (0.999); NOC4 (0.999); NAN1 (0.999); NOP56 (0.999); ROK1 (0.999); ECM16 (0.999); ESF1 (0.999); CKA1 (0.999); UTP15 (0.999); EMG1 (0.999); KRE33 (0.999); MPP10 (0.999); RRP9 (0.999); DIP2 (0.999); SOF1 (0.999)
Homologues (species, bitscore): NOL6 (Homo sapiens, 253.4); Nol6 (Mus musculus, 264.2); nol6 (Danio rerio, 273.1); nol6 (Xenopus tropicalis, 259.2); Mat89Ba (Drosophila melanogaster, 224.2); nol-6 (Caenorhabditis elegans, 100.5); AT1G63810 (Arabidopsis thaliana, 234.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:646539-650252:+ | gene-YGR090W_AKU4011 | rna-NM_001181219.3_AKU4011 | cds-NP_011604.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:82345-86058:+ | gene-YGR090W_BG1 | rna-NM_001181219.3_BG1 | cds-NP_011604.3_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:648728-652441:+ | gene-YGR090W_Bruggeman | rna-NM_001181219.3_Bruggeman | cds-NP_011604.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:646917-650630:+ | gene-YGR090W_CAT1 | rna-NM_001181219.3_CAT1 | cds-NP_011604.3_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:647503-651216:+ | gene-YGR090W_CBS1585 | rna-NM_001181219.3_CBS1585 | cds-NP_011604.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:649162-652875:+ | gene-YGR090W_CBS436 | rna-NM_001181219.3_CBS436 | cds-NP_011604.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:639196-642909:+ | gene-YGR090W_CBS6412 | rna-NM_001181219.3_CBS6412 | cds-NP_011604.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:644138-647851:+ | gene-YGR090W_CBS6413 | rna-NM_001181219.3_CBS6413 | cds-NP_011604.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:662035-665748:+ | gene-YGR090W_CENPK1137D | rna-NM_001181219.3_CENPK1137D | cds-NP_011604.3_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:634090-637803:+ | gene-YGR090W_EthanolRed | rna-NM_001181219.3_EthanolRed | cds-NP_011604.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:637935-641648:+ | gene-YGR090W_FaliES1 | rna-NM_001181219.3_FaliES1 | cds-NP_011604.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000396.1:34907-38620:- | gene-YGR090W_JAY291 | rna-NM_001181219.3_JAY291 | cds-NP_011604.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:645716-649429:+ | gene-YGR090W_MUCL30387 | rna-NM_001181219.3_MUCL30387 | cds-NP_011604.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:648527-652240:+ | gene-YGR090W_MUCL30388 | rna-NM_001181219.3_MUCL30388 | cds-NP_011604.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:643231-646944:+ | gene-YGR090W_MUCL39482 | rna-NM_001181219.3_MUCL39482 | cds-NP_011604.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:653540-657253:+ | gene-YGR090W_MUCL42920 | rna-NM_001181219.3_MUCL42920 | cds-NP_011604.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:662358-666071:+ | gene-YGR090W_NCIM3186 | rna-NM_001181219.3_NCIM3186 | cds-NP_011604.3_NCIM3186 | 91.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:637920-641633:+ | gene-YGR090W_NCYC1407 | rna-NM_001181219.3_NCYC1407 | cds-NP_011604.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:640608-644321:+ | gene-YGR090W_PE2H3 | rna-NM_001181219.3_PE2H3 | cds-NP_011604.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:645727-649440:+ | gene-YGR090W_PE2H4 | rna-NM_001181219.3_PE2H4 | cds-NP_011604.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:662358-666071:+ | gene-YGR090W_S288C | rna-NM_001181219.3_S288C | cds-NP_011604.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:88932-92645:+ | gene-YGR090W_SA1 | rna-NM_001181219.3_SA1 | cds-NP_011604.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:658305-662018:+ | gene-YGR090W_ThermosaccDry | rna-NM_001181219.3_ThermosaccDry | cds-NP_011604.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:754797-758510:+ | gene-YGR090W_VR1 | rna-NM_001181219.3_VR1 | cds-NP_011604.3_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:112557-116269:+ | gene-YGR090W_ZTW1 | rna-NM_001181219.3_ZTW1 | cds-NP_011604.3_ZTW1 | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:648304-652020:+ | gene-YGR090W_Sparadoxus | rna-NM_001181219.3_Sparadoxus | cds-NP_011604.3_Sparadoxus | 91.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |