Gene name: UTP14
Reference locus (S288C): YML093W
Gene biotype: protein_coding
Description: U3 small nucleolar RNA-associated protein 14; Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit; Belongs to the UTP14 family
Top 10 interactors (score): LCP5 (0.999); SPB1 (0.999); UTP13 (0.999); UTP5 (0.999); IMP3 (0.999); HAS1 (0.999); UTP25 (0.999); NOP1 (0.999); UTP18 (0.999); IMP4 (0.999); DRS1 (0.999); NOP58 (0.999); PWP2 (0.999); MTR4 (0.999); ENP2 (0.999); RRP9 (0.999); DIP2 (0.999); NAN1 (0.999); NOP56 (0.999); UTP15 (0.999)
Homologues (species, bitscore): UTP14A (Homo sapiens, 230.7); Utp14a (Mus musculus, 225.3); UTP14A (Danio rerio, 200.7); utp14a (Xenopus tropicalis, 211.8); CG12301 (Drosophila melanogaster, 122.9); F27C1.6 (Caenorhabditis elegans, 142.5); AT4G02400 (Arabidopsis thaliana, 198.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:76812-79511:+ | gene-YML093W_AKU4011 | rna-NM_001182452.1_AKU4011 | cds-NP_013617.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:396618-399317:- | gene-YML093W_BG1 | rna-NM_001182452.1_BG1 | cds-NP_013617.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:83066-85765:+ | gene-YML093W_Bruggeman | rna-NM_001182452.1_Bruggeman | cds-NP_013617.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:84624-87323:+ | gene-YML093W_CAT1 | rna-NM_001182452.1_CAT1 | cds-NP_013617.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:76813-79512:+ | gene-YML093W_CBS1585 | rna-NM_001182452.1_CBS1585 | cds-NP_013617.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:82805-85504:+ | gene-YML093W_CBS436 | rna-NM_001182452.1_CBS436 | cds-NP_013617.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:77577-80276:+ | gene-YML093W_CBS6412 | rna-NM_001182452.1_CBS6412 | cds-NP_013617.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:76041-78740:+ | gene-YML093W_CBS6413 | rna-NM_001182452.1_CBS6413 | cds-NP_013617.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:77680-80379:+ | gene-YML093W_CENPK1137D | rna-NM_001182452.1_CENPK1137D | cds-NP_013617.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:77317-80016:+ | gene-YML093W_EthanolRed | rna-NM_001182452.1_EthanolRed | cds-NP_013617.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:77594-80293:+ | gene-YML093W_FaliES1 | rna-NM_001182452.1_FaliES1 | cds-NP_013617.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:9889-12588:- | gene-YML093W_JAY291 | rna-NM_001182452.1_JAY291 | cds-NP_013617.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:81511-84210:+ | gene-YML093W_MUCL30387 | rna-NM_001182452.1_MUCL30387 | cds-NP_013617.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:84735-87434:+ | gene-YML093W_MUCL30388 | rna-NM_001182452.1_MUCL30388 | cds-NP_013617.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:76827-79526:+ | gene-YML093W_MUCL39482 | rna-NM_001182452.1_MUCL39482 | cds-NP_013617.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:81625-84324:+ | gene-YML093W_MUCL42920 | rna-NM_001182452.1_MUCL42920 | cds-NP_013617.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:83044-85743:+ | gene-YML093W_NCIM3186 | rna-NM_001182452.1_NCIM3186 | cds-NP_013617.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:77621-80320:+ | gene-YML093W_NCYC1407 | rna-NM_001182452.1_NCYC1407 | cds-NP_013617.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:83054-85753:+ | gene-YML093W_PE2H3 | rna-NM_001182452.1_PE2H3 | cds-NP_013617.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:82992-85691:+ | gene-YML093W_PE2H4 | rna-NM_001182452.1_PE2H4 | cds-NP_013617.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:83090-85789:+ | gene-YML093W_S288C | rna-NM_001182452.1_S288C | cds-NP_013617.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:75058-77757:+ | gene-YML093W_SA1 | rna-NM_001182452.1_SA1 | cds-NP_013617.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:76890-79589:+ | gene-YML093W_ThermosaccDry | rna-NM_001182452.1_ThermosaccDry | cds-NP_013617.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:81273-83972:+ | gene-YML093W_VR1 | rna-NM_001182452.1_VR1 | cds-NP_013617.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:56390-59089:+ | gene-YML093W_ZTW1 | rna-NM_001182452.1_ZTW1 | cds-NP_013617.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:87679-90381:+ | gene-YML093W_Sparadoxus | rna-NM_001182452.1_Sparadoxus | cds-NP_013617.1_Sparadoxus | 88.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |