Gene name: URN1
Reference locus (S288C): YPR152C
Gene biotype: protein_coding
Description: Pre-mRNA-splicing factor URN1; Protein of unknown function containing WW and FF domains; overexpression causes accumulation of cells in G1 phase
Top 10 interactors (score): HUB1 (0.999); CEF1 (0.986); SNU71 (0.923); LUC7 (0.901); CLF1 (0.894); PRP40 (0.887); SNU66 (0.885); CUS1 (0.873); HSH155 (0.869); SNP1 (0.823); IST3 (0.814); PRP21 (0.812); SET2 (0.808); RSE1 (0.805); MSL1 (0.793); PML1 (0.792); PRP11 (0.79); ISY1 (0.776); PRP9 (0.775); AIM4 (0.775)
Homologues (species, bitscore): PRP40C (Arabidopsis thaliana, 54.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:798215-799600:- | gene-YPR152C_AKU4011 | rna-NM_001184249.1_AKU4011 | cds-NP_015478.1_AKU4011 | 98.1 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:97771-99156:+ | gene-YPR152C_BG1 | rna-NM_001184249.1_BG1 | cds-NP_015478.1_BG1 | 98.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:878506-879891:- | gene-YPR152C_Bruggeman | rna-NM_001184249.1_Bruggeman | cds-NP_015478.1_Bruggeman | 98.8 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:920778-922163:- | gene-YPR152C_CAT1 | rna-NM_001184249.1_CAT1 | cds-NP_015478.1_CAT1 | 98.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:802453-803838:- | gene-YPR152C_CBS1585 | rna-NM_001184249.1_CBS1585 | cds-NP_015478.1_CBS1585 | 98.1 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:816570-817955:- | gene-YPR152C_CBS436 | rna-NM_001184249.1_CBS436 | cds-NP_015478.1_CBS436 | 98.9 | 99.1 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:805200-806585:- | gene-YPR152C_CBS6412 | rna-NM_001184249.1_CBS6412 | cds-NP_015478.1_CBS6412 | 98.0 | 99.1 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:799907-801292:- | gene-YPR152C_CBS6413 | rna-NM_001184249.1_CBS6413 | cds-NP_015478.1_CBS6413 | 98.1 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:832056-833453:- | gene-YPR152C_CENPK1137D | rna-NM_001184249.1_CENPK1137D | cds-NP_015478.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1120363-1121748:- | gene-YPR152C_EthanolRed | rna-NM_001184249.1_EthanolRed | cds-NP_015478.1_EthanolRed | 98.1 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:799910-801295:- | gene-YPR152C_FaliES1 | rna-NM_001184249.1_FaliES1 | cds-NP_015478.1_FaliES1 | 98.1 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000437.1:12648-14033:- | gene-YPR152C_JAY291 | rna-NM_001184249.1_JAY291 | cds-NP_015478.1_JAY291 | 98.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:818690-820075:- | gene-YPR152C_MUCL30387 | rna-NM_001184249.1_MUCL30387 | cds-NP_015478.1_MUCL30387 | 98.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:819488-820820:- | gene-YPR152C_MUCL30388 | rna-NM_001184249.1_MUCL30388 | cds-NP_015478.1_MUCL30388 | 90.8 | 94.4 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:794966-796351:- | gene-YPR152C_MUCL39482 | rna-NM_001184249.1_MUCL39482 | cds-NP_015478.1_MUCL39482 | 98.0 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:858415-859800:- | gene-YPR152C_MUCL42920 | rna-NM_001184249.1_MUCL42920 | cds-NP_015478.1_MUCL42920 | 98.6 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:832044-833441:- | gene-YPR152C_NCIM3186 | rna-NM_001184249.1_NCIM3186 | cds-NP_015478.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:803572-804957:- | gene-YPR152C_NCYC1407 | rna-NM_001184249.1_NCYC1407 | cds-NP_015478.1_NCYC1407 | 98.1 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:810288-811673:- | gene-YPR152C_PE2H3 | rna-NM_001184249.1_PE2H3 | cds-NP_015478.1_PE2H3 | 98.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:809936-811321:- | gene-YPR152C_PE2H4 | rna-NM_001184249.1_PE2H4 | cds-NP_015478.1_PE2H4 | 98.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:832061-833458:- | gene-YPR152C_S288C | rna-NM_001184249.1_S288C | cds-NP_015478.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000028.1:124313-125710:- | gene-YPR152C_SA1 | rna-NM_001184249.1_SA1 | cds-NP_015478.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:799352-800737:- | gene-YPR152C_ThermosaccDry | rna-NM_001184249.1_ThermosaccDry | cds-NP_015478.1_ThermosaccDry | 98.1 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:821788-823173:- | gene-YPR152C_VR1 | rna-NM_001184249.1_VR1 | cds-NP_015478.1_VR1 | 98.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:802726-804111:- | gene-YPR152C_ZTW1 | rna-NM_001184249.1_ZTW1 | cds-NP_015478.1_ZTW1 | 98.8 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:804794-806159:- | gene-YPR152C_Sparadoxus | rna-NM_001184249.1_Sparadoxus | cds-NP_015478.1_Sparadoxus | 84.4 | 97.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |