Gene name: URM1
Reference locus (S288C): YIL008W
Gene biotype: protein_coding
Description: Ubiquitin-related modifier 1; Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs; receives sulfur from the E1-like enzyme Uba4p and transfers it to tRNA; also functions as a protein tag with roles in nutrient sensing and oxidative stress response
Top 10 interactors (score): UBA4 (0.999); AHP1 (0.998); NCS2 (0.998); NCS6 (0.996); TUM1 (0.981); ELP2 (0.978); IKI3 (0.976); ELP3 (0.975); UBA1 (0.968); TAE1 (0.962); NFS1 (0.959); ATG12 (0.954); TRM9 (0.952); MCM5 (0.951); TRM112 (0.942); ATG8 (0.933); ELP4 (0.933); ELP6 (0.924); UBA3 (0.922); AOS1 (0.919)
Homologues (species, bitscore): URM1 (Homo sapiens, 55.1); Urm1 (Mus musculus, 82.4); urm1 (Danio rerio, 75.5); CG33276 (Drosophila melanogaster, 76.3); urm-1 (Caenorhabditis elegans, 57.0); AT3G61113 (Arabidopsis thaliana, 77.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:341865-342164:+ | gene-YIL008W_AKU4011 | rna-NM_001179358.3_AKU4011 | cds-NP_012258.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:84376-84675:- | gene-YIL008W_BG1 | rna-NM_001179358.3_BG1 | cds-NP_012258.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:346390-346689:+ | gene-YIL008W_Bruggeman | rna-NM_001179358.3_Bruggeman | cds-NP_012258.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:333033-333332:+ | gene-YIL008W_CAT1 | rna-NM_001179358.3_CAT1 | cds-NP_012258.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:341938-342237:+ | gene-YIL008W_CBS1585 | rna-NM_001179358.3_CBS1585 | cds-NP_012258.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:334666-334965:+ | gene-YIL008W_CBS436 | rna-NM_001179358.3_CBS436 | cds-NP_012258.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:337344-337643:+ | gene-YIL008W_CBS6412 | rna-NM_001179358.3_CBS6412 | cds-NP_012258.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:334025-334324:+ | gene-YIL008W_CBS6413 | rna-NM_001179358.3_CBS6413 | cds-NP_012258.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:334597-334896:+ | gene-YIL008W_CENPK1137D | rna-NM_001179358.3_CENPK1137D | cds-NP_012258.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:324980-325279:+ | gene-YIL008W_EthanolRed | rna-NM_001179358.3_EthanolRed | cds-NP_012258.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:343226-343525:+ | gene-YIL008W_FaliES1 | rna-NM_001179358.3_FaliES1 | cds-NP_012258.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000009.1:47958-48257:- | gene-YIL008W_JAY291 | rna-NM_001179358.3_JAY291 | cds-NP_012258.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:343562-343861:+ | gene-YIL008W_MUCL30387 | rna-NM_001179358.3_MUCL30387 | cds-NP_012258.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:340310-340609:+ | gene-YIL008W_MUCL30388 | rna-NM_001179358.3_MUCL30388 | cds-NP_012258.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:342554-342853:+ | gene-YIL008W_MUCL39482 | rna-NM_001179358.3_MUCL39482 | cds-NP_012258.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:346192-346491:+ | gene-YIL008W_MUCL42920 | rna-NM_001179358.3_MUCL42920 | cds-NP_012258.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:342536-342835:+ | gene-YIL008W_NCIM3186 | rna-NM_001179358.3_NCIM3186 | cds-NP_012258.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:346822-347121:+ | gene-YIL008W_NCYC1407 | rna-NM_001179358.3_NCYC1407 | cds-NP_012258.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:336611-336910:+ | gene-YIL008W_PE2H3 | rna-NM_001179358.3_PE2H3 | cds-NP_012258.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:331317-331616:+ | gene-YIL008W_PE2H4 | rna-NM_001179358.3_PE2H4 | cds-NP_012258.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:342536-342835:+ | gene-YIL008W_S288C | rna-NM_001179358.3_S288C | cds-NP_012258.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000066.1:17362-17661:+ | gene-YIL008W_SA1 | rna-NM_001179358.3_SA1 | cds-NP_012258.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:341331-341630:+ | gene-YIL008W_ThermosaccDry | rna-NM_001179358.3_ThermosaccDry | cds-NP_012258.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:337172-337471:+ | gene-YIL008W_VR1 | rna-NM_001179358.3_VR1 | cds-NP_012258.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:315332-315631:+ | gene-YIL008W_ZTW1 | rna-NM_001179358.3_ZTW1 | cds-NP_012258.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:336709-337008:+ | gene-YIL008W_Sparadoxus | rna-NM_001179358.3_Sparadoxus | cds-NP_012258.3_Sparadoxus | 94.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |