Gene name: URK1
Reference locus (S288C): YNR012W
Gene biotype: protein_coding
Description: Uridine/cytidine kinase; component of the pyrimidine ribonucleotide salvage pathway that converts uridine into UMP and cytidine into CMP; involved in the pyrimidine deoxyribonucleotide salvage pathway, converting deoxycytidine into dCMP
Top 10 interactors (score): CDD1 (0.997); URA6 (0.997); URH1 (0.993); URA3 (0.993); FUR1 (0.989); DAS2 (0.96); YND1 (0.904); AAH1 (0.892); YLR256W-A (0.818); DHR2 (0.8); URA5 (0.788); SST2 (0.782); RGS2 (0.782); RVB2 (0.768); YTM1 (0.766); SKP1 (0.764); URA1 (0.763); ARX1 (0.758); MCK1 (0.739); MRK1 (0.739)
Homologues (species, bitscore): UCKL1 (Homo sapiens, 305.1); Uckl1 (Mus musculus, 302.4); uckl1a (Danio rerio, 315.5); uck2 (Xenopus tropicalis, 177.2); l(2)k01209 (Drosophila melanogaster, 310.1); F19B6.1 (Caenorhabditis elegans, 296.6); UKL5 (Arabidopsis thaliana, 241.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:631015-632520:+ | gene-YNR012W_AKU4011 | rna-NM_001183189.1_AKU4011 | cds-NP_014409.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:538959-540464:+ | gene-YNR012W_BG1 | rna-NM_001183189.1_BG1 | cds-NP_014409.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:648507-650012:+ | gene-YNR012W_Bruggeman | rna-NM_001183189.1_Bruggeman | cds-NP_014409.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:682734-684239:+ | gene-YNR012W_CAT1 | rna-NM_001183189.1_CAT1 | cds-NP_014409.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:636811-638316:+ | gene-YNR012W_CBS1585 | rna-NM_001183189.1_CBS1585 | cds-NP_014409.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:698504-700009:+ | gene-YNR012W_CBS436 | rna-NM_001183189.1_CBS436 | cds-NP_014409.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:626377-627882:+ | gene-YNR012W_CBS6412 | rna-NM_001183189.1_CBS6412 | cds-NP_014409.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:627705-629210:+ | gene-YNR012W_CBS6413 | rna-NM_001183189.1_CBS6413 | cds-NP_014409.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:641118-642623:+ | gene-YNR012W_CENPK1137D | rna-NM_001183189.1_CENPK1137D | cds-NP_014409.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:632930-634435:+ | gene-YNR012W_EthanolRed | rna-NM_001183189.1_EthanolRed | cds-NP_014409.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:623948-625453:+ | gene-YNR012W_FaliES1 | rna-NM_001183189.1_FaliES1 | cds-NP_014409.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:77284-78789:- | gene-YNR012W_JAY291 | rna-NM_001183189.1_JAY291 | cds-NP_014409.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:646261-647766:+ | gene-YNR012W_MUCL30387 | rna-NM_001183189.1_MUCL30387 | cds-NP_014409.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:687093-688598:+ | gene-YNR012W_MUCL30388 | rna-NM_001183189.1_MUCL30388 | cds-NP_014409.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:628317-629822:+ | gene-YNR012W_MUCL39482 | rna-NM_001183189.1_MUCL39482 | cds-NP_014409.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:632503-634008:+ | gene-YNR012W_MUCL42920 | rna-NM_001183189.1_MUCL42920 | cds-NP_014409.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:647401-648906:+ | gene-YNR012W_NCIM3186 | rna-NM_001183189.1_NCIM3186 | cds-NP_014409.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:630823-632328:+ | gene-YNR012W_NCYC1407 | rna-NM_001183189.1_NCYC1407 | cds-NP_014409.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:631912-633417:+ | gene-YNR012W_PE2H3 | rna-NM_001183189.1_PE2H3 | cds-NP_014409.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:633230-634735:+ | gene-YNR012W_PE2H4 | rna-NM_001183189.1_PE2H4 | cds-NP_014409.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:647432-648937:+ | gene-YNR012W_S288C | rna-NM_001183189.1_S288C | cds-NP_014409.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000068.1:45137-46642:+ | gene-YNR012W_SA1 | rna-NM_001183189.1_SA1 | cds-NP_014409.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:624288-625793:+ | gene-YNR012W_ThermosaccDry | rna-NM_001183189.1_ThermosaccDry | cds-NP_014409.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:666256-667761:+ | gene-YNR012W_VR1 | rna-NM_001183189.1_VR1 | cds-NP_014409.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:533197-534702:+ | gene-YNR012W_ZTW1 | rna-NM_001183189.1_ZTW1 | cds-NP_014409.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:638399-639904:+ | gene-YNR012W_Sparadoxus | rna-NM_001183189.1_Sparadoxus | cds-NP_014409.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |