Gene name: URH1
Reference locus (S288C): YDR400W
Gene biotype: protein_coding
Description: Uridine nucleosidase (uridine-cytidine N-ribohydrolase); cleaves N-glycosidic bonds in nucleosides; involved in the pyrimidine salvage and nicotinamide riboside salvage pathways; Belongs to the IUNH family
Top 10 interactors (score): PNP1 (0.997); URK1 (0.993); CDD1 (0.991); SDT1 (0.99); ISN1 (0.988); NRK1 (0.988); PNC1 (0.977); SIR2 (0.977); FCY1 (0.971); NPT1 (0.967); SSD1 (0.964); INO1 (0.962); SGT2 (0.962); LIA1 (0.962); SHE4 (0.962); NMA2 (0.952); NMA1 (0.952); FUR1 (0.931); MEU1 (0.927); DAS2 (0.926)
Homologues (species, bitscore): si:ch211-201h21.5 (Danio rerio, 96.3); LOC548390 (Xenopus tropicalis, 97.4); CG11158 (Drosophila melanogaster, 64.7); F13H8.3 (Caenorhabditis elegans, 76.3); URH1 (Arabidopsis thaliana, 108.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1211208-1212230:+ | gene-YDR400W_AKU4011 | rna-NM_001180708.3_AKU4011 | cds-NP_010688.4_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:89688-90710:+ | gene-YDR400W_BG1 | rna-NM_001180708.3_BG1 | cds-NP_010688.4_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1242089-1243111:+ | gene-YDR400W_Bruggeman | rna-NM_001180708.3_Bruggeman | cds-NP_010688.4_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1220645-1221667:+ | gene-YDR400W_CAT1 | rna-NM_001180708.3_CAT1 | cds-NP_010688.4_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1206129-1207151:+ | gene-YDR400W_CBS1585 | rna-NM_001180708.3_CBS1585 | cds-NP_010688.4_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1224992-1226014:+ | gene-YDR400W_CBS436 | rna-NM_001180708.3_CBS436 | cds-NP_010688.4_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1202182-1203204:+ | gene-YDR400W_CBS6412 | rna-NM_001180708.3_CBS6412 | cds-NP_010688.4_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1224037-1225059:+ | gene-YDR400W_CBS6413 | rna-NM_001180708.3_CBS6413 | cds-NP_010688.4_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1269726-1270748:+ | gene-YDR400W_CENPK1137D | rna-NM_001180708.3_CENPK1137D | cds-NP_010688.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1215615-1216637:+ | gene-YDR400W_EthanolRed | rna-NM_001180708.3_EthanolRed | cds-NP_010688.4_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1218925-1219947:+ | gene-YDR400W_FaliES1 | rna-NM_001180708.3_FaliES1 | cds-NP_010688.4_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000181.1:35590-36612:- | gene-YDR400W_JAY291 | rna-NM_001180708.3_JAY291 | cds-NP_010688.4_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1225651-1226673:+ | gene-YDR400W_MUCL30387 | rna-NM_001180708.3_MUCL30387 | cds-NP_010688.4_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1207762-1208784:+ | gene-YDR400W_MUCL30388 | rna-NM_001180708.3_MUCL30388 | cds-NP_010688.4_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1197457-1198479:+ | gene-YDR400W_MUCL39482 | rna-NM_001180708.3_MUCL39482 | cds-NP_010688.4_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1139891-1140913:+ | gene-YDR400W_MUCL42920 | rna-NM_001180708.3_MUCL42920 | cds-NP_010688.4_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1270986-1272008:+ | gene-YDR400W_NCIM3186 | rna-NM_001180708.3_NCIM3186 | cds-NP_010688.4_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1211429-1212451:+ | gene-YDR400W_NCYC1407 | rna-NM_001180708.3_NCYC1407 | cds-NP_010688.4_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1221557-1222579:+ | gene-YDR400W_PE2H3 | rna-NM_001180708.3_PE2H3 | cds-NP_010688.4_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1227125-1228147:+ | gene-YDR400W_PE2H4 | rna-NM_001180708.3_PE2H4 | cds-NP_010688.4_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1271063-1272085:+ | gene-YDR400W_S288C | rna-NM_001180708.3_S288C | cds-NP_010688.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000071.1:35707-36729:- | gene-YDR400W_SA1 | rna-NM_001180708.3_SA1 | cds-NP_010688.4_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1223187-1224209:+ | gene-YDR400W_ThermosaccDry | rna-NM_001180708.3_ThermosaccDry | cds-NP_010688.4_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1238364-1239386:+ | gene-YDR400W_VR1 | rna-NM_001180708.3_VR1 | cds-NP_010688.4_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:265994-267013:+ | gene-YDR400W_ZTW1 | rna-NM_001180708.3_ZTW1 | cds-NP_010688.4_ZTW1 | 99.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1218279-1219301:+ | gene-YDR400W_Sparadoxus | rna-NM_001180708.3_Sparadoxus | cds-NP_010688.4_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |