Gene name: URC2
Reference locus (S288C): YDR520C
Gene biotype: protein_coding
Description: Uracil catabolism protein 2; Putative Zn(II)2Cys6 motif containing transcription factor; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; similar to S. kluyveri Urc2p involved in uracil catabolism
Top 10 interactors (score): DAL80 (0.847); AHC2 (0.749); OAF3 (0.749); YLR278C (0.748); YJL206C (0.747); CPD1 (0.745); YPR196W (0.712); GCD7 (0.645); ADY3 (0.645); FUR1 (0.62); URH1 (0.612); DAL82 (0.598); LIA1 (0.573); SWP82 (0.57); HAL9 (0.57); RSC3 (0.525); STB4 (0.499); LYS14 (0.485); YCG1 (0.481); YLR287C (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1421129-1423447:- | gene-YDR520C_AKU4011 | rna-NM_001180828.3_AKU4011 | cds-NP_010808.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:62751-65069:- | gene-YDR520C_BG1 | rna-NM_001180828.3_BG1 | cds-NP_010808.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1452416-1454734:- | gene-YDR520C_Bruggeman | rna-NM_001180828.3_Bruggeman | cds-NP_010808.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1429587-1431905:- | gene-YDR520C_CAT1 | rna-NM_001180828.3_CAT1 | cds-NP_010808.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1415855-1418173:- | gene-YDR520C_CBS1585 | rna-NM_001180828.3_CBS1585 | cds-NP_010808.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1435062-1437380:- | gene-YDR520C_CBS436 | rna-NM_001180828.3_CBS436 | cds-NP_010808.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1411020-1413338:- | gene-YDR520C_CBS6412 | rna-NM_001180828.3_CBS6412 | cds-NP_010808.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1434517-1436835:- | gene-YDR520C_CBS6413 | rna-NM_001180828.3_CBS6413 | cds-NP_010808.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1479775-1482093:- | gene-YDR520C_CENPK1137D | rna-NM_001180828.3_CENPK1137D | cds-NP_010808.3_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1424387-1426705:- | gene-YDR520C_EthanolRed | rna-NM_001180828.3_EthanolRed | cds-NP_010808.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1427939-1430257:- | gene-YDR520C_FaliES1 | rna-NM_001180828.3_FaliES1 | cds-NP_010808.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:126289-128607:- | gene-YDR520C_JAY291 | rna-NM_001180828.3_JAY291 | cds-NP_010808.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1435506-1437824:- | gene-YDR520C_MUCL30387 | rna-NM_001180828.3_MUCL30387 | cds-NP_010808.3_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1416959-1419277:- | gene-YDR520C_MUCL30388 | rna-NM_001180828.3_MUCL30388 | cds-NP_010808.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1407353-1409671:- | gene-YDR520C_MUCL39482 | rna-NM_001180828.3_MUCL39482 | cds-NP_010808.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1349985-1352303:- | gene-YDR520C_MUCL42920 | rna-NM_001180828.3_MUCL42920 | cds-NP_010808.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1481008-1483326:- | gene-YDR520C_NCIM3186 | rna-NM_001180828.3_NCIM3186 | cds-NP_010808.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1420645-1422963:- | gene-YDR520C_NCYC1407 | rna-NM_001180828.3_NCYC1407 | cds-NP_010808.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1431557-1433875:- | gene-YDR520C_PE2H3 | rna-NM_001180828.3_PE2H3 | cds-NP_010808.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1437025-1439343:- | gene-YDR520C_PE2H4 | rna-NM_001180828.3_PE2H4 | cds-NP_010808.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1481085-1483403:- | gene-YDR520C_S288C | rna-NM_001180828.3_S288C | cds-NP_010808.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:133709-136027:+ | gene-YDR520C_SA1 | rna-NM_001180828.3_SA1 | cds-NP_010808.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1432161-1434479:- | gene-YDR520C_ThermosaccDry | rna-NM_001180828.3_ThermosaccDry | cds-NP_010808.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1447932-1450250:- | gene-YDR520C_VR1 | rna-NM_001180828.3_VR1 | cds-NP_010808.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:474803-477121:- | gene-YDR520C_ZTW1 | rna-NM_001180828.3_ZTW1 | cds-NP_010808.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1441098-1443416:- | gene-YDR520C_Sparadoxus | rna-NM_001180828.3_Sparadoxus | cds-NP_010808.3_Sparadoxus | 88.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |