Gene name: URA4
Reference locus (S288C): YLR420W
Gene biotype: protein_coding
Description: Dihydroorotase; catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate
Top 10 interactors (score): URA1 (0.999); URA2 (0.997); PPR1 (0.994); URA5 (0.986); URA3 (0.963); ADE6 (0.913); URA6 (0.912); YNK1 (0.908); URA10 (0.898); SIR3 (0.889); AAT2 (0.879); MON2 (0.872); PML39 (0.872); CST6 (0.872); TFC7 (0.868); NMT1 (0.823); LCD1 (0.809); LYP1 (0.787); LEU1 (0.779); ESA1 (0.754)
Homologues (species, bitscore): PYR4 (Arabidopsis thaliana, 178.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:907334-908428:+ | gene-YLR420W_AKU4011 | rna-NM_001182308.1_AKU4011 | cds-NP_013524.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:139499-140593:+ | gene-YLR420W_BG1 | rna-NM_001182308.1_BG1 | cds-NP_013524.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:945637-946731:+ | gene-YLR420W_Bruggeman | rna-NM_001182308.1_Bruggeman | cds-NP_013524.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:941184-942278:+ | gene-YLR420W_CAT1 | rna-NM_001182308.1_CAT1 | cds-NP_013524.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:942931-944025:+ | gene-YLR420W_CBS1585 | rna-NM_001182308.1_CBS1585 | cds-NP_013524.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:926588-927682:+ | gene-YLR420W_CBS436 | rna-NM_001182308.1_CBS436 | cds-NP_013524.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:978971-980065:+ | gene-YLR420W_CBS6412 | rna-NM_001182308.1_CBS6412 | cds-NP_013524.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:943223-944317:+ | gene-YLR420W_CBS6413 | rna-NM_001182308.1_CBS6413 | cds-NP_013524.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:942985-944079:+ | gene-YLR420W_CENPK1137D | rna-NM_001182308.1_CENPK1137D | cds-NP_013524.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:900214-901308:+ | gene-YLR420W_EthanolRed | rna-NM_001182308.1_EthanolRed | cds-NP_013524.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:929695-930789:+ | gene-YLR420W_FaliES1 | rna-NM_001182308.1_FaliES1 | cds-NP_013524.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000434.1:82328-83422:+ | gene-YLR420W_JAY291 | rna-NM_001182308.1_JAY291 | cds-NP_013524.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:944500-945594:+ | gene-YLR420W_MUCL30387 | rna-NM_001182308.1_MUCL30387 | cds-NP_013524.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:950603-951697:+ | gene-YLR420W_MUCL30388 | rna-NM_001182308.1_MUCL30388 | cds-NP_013524.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:944151-945245:+ | gene-YLR420W_MUCL39482 | rna-NM_001182308.1_MUCL39482 | cds-NP_013524.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:938808-939902:+ | gene-YLR420W_MUCL42920 | rna-NM_001182308.1_MUCL42920 | cds-NP_013524.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:963759-964853:+ | gene-YLR420W_NCIM3186 | rna-NM_001182308.1_NCIM3186 | cds-NP_013524.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:953330-954424:+ | gene-YLR420W_NCYC1407 | rna-NM_001182308.1_NCYC1407 | cds-NP_013524.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:939709-940803:+ | gene-YLR420W_PE2H3 | rna-NM_001182308.1_PE2H3 | cds-NP_013524.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:939453-940547:+ | gene-YLR420W_PE2H4 | rna-NM_001182308.1_PE2H4 | cds-NP_013524.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:963785-964879:+ | gene-YLR420W_S288C | rna-NM_001182308.1_S288C | cds-NP_013524.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:89794-90888:- | gene-YLR420W_SA1 | rna-NM_001182308.1_SA1 | cds-NP_013524.1_SA1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:932774-933868:+ | gene-YLR420W_ThermosaccDry | rna-NM_001182308.1_ThermosaccDry | cds-NP_013524.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:945151-946245:+ | gene-YLR420W_VR1 | rna-NM_001182308.1_VR1 | cds-NP_013524.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:268987-270081:+ | gene-YLR420W_ZTW1 | rna-NM_001182308.1_ZTW1 | cds-NP_013524.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:918185-919279:+ | gene-YLR420W_Sparadoxus | rna-NM_001182308.1_Sparadoxus | cds-NP_013524.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |