Gene name: UNG1
Reference locus (S288C): YML021C
Gene biotype: protein_coding
Description: Uracil-DNA glycosylase; required for repair of uracil in DNA formed by spontaneous cytosine deamination; efficiently excises uracil from single-stranded DNA in vivo; not required for strand-specific mismatch repair; cell-cycle regulated, expressed in late G1; localizes to mitochondria and nucleus
Top 10 interactors (score): DUT1 (0.996); APN1 (0.993); APN2 (0.993); CDC21 (0.986); RAD27 (0.982); RFA2 (0.98); OGG1 (0.975); NTG2 (0.974); MSH6 (0.964); NTG1 (0.955); CDC9 (0.945); POL30 (0.932); POL12 (0.925); RAD14 (0.925); PRI1 (0.917); POL1 (0.909); CDC6 (0.896); REV1 (0.892); MCM5 (0.885); MSH2 (0.883)
Homologues (species, bitscore): UNG (Homo sapiens, 229.2); Ung (Mus musculus, 225.7); unga (Danio rerio, 223.0); ung (Xenopus tropicalis, 236.9); ung-1 (Caenorhabditis elegans, 186.8); UNG (Arabidopsis thaliana, 164.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:279328-280407:- | gene-YML021C_AKU4011 | rna-NM_001182379.1_AKU4011 | cds-NP_013691.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:262468-263547:+ | gene-YML021C_BG1 | rna-NM_001182379.1_BG1 | cds-NP_013691.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:219281-220360:- | gene-YML021C_Bruggeman | rna-NM_001182379.1_Bruggeman | cds-NP_013691.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:221791-222870:- | gene-YML021C_CAT1 | rna-NM_001182379.1_CAT1 | cds-NP_013691.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:212278-213357:- | gene-YML021C_CBS1585 | rna-NM_001182379.1_CBS1585 | cds-NP_013691.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:217811-218890:- | gene-YML021C_CBS436 | rna-NM_001182379.1_CBS436 | cds-NP_013691.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:326015-327094:- | gene-YML021C_CBS6412 | rna-NM_001182379.1_CBS6412 | cds-NP_013691.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:211535-212614:- | gene-YML021C_CBS6413 | rna-NM_001182379.1_CBS6413 | cds-NP_013691.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:224256-225335:- | gene-YML021C_CENPK1137D | rna-NM_001182379.1_CENPK1137D | cds-NP_013691.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:212302-213381:- | gene-YML021C_EthanolRed | rna-NM_001182379.1_EthanolRed | cds-NP_013691.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:215266-216345:- | gene-YML021C_FaliES1 | rna-NM_001182379.1_FaliES1 | cds-NP_013691.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:220572-221651:+ | gene-YML021C_JAY291 | rna-NM_001182379.1_JAY291 | cds-NP_013691.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:217011-218090:- | gene-YML021C_MUCL30387 | rna-NM_001182379.1_MUCL30387 | cds-NP_013691.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:221680-222759:- | gene-YML021C_MUCL30388 | rna-NM_001182379.1_MUCL30388 | cds-NP_013691.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:212563-213642:- | gene-YML021C_MUCL39482 | rna-NM_001182379.1_MUCL39482 | cds-NP_013691.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:218116-219195:- | gene-YML021C_MUCL42920 | rna-NM_001182379.1_MUCL42920 | cds-NP_013691.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:229688-230767:- | gene-YML021C_NCIM3186 | rna-NM_001182379.1_NCIM3186 | cds-NP_013691.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:212504-213583:- | gene-YML021C_NCYC1407 | rna-NM_001182379.1_NCYC1407 | cds-NP_013691.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:218402-219481:- | gene-YML021C_PE2H3 | rna-NM_001182379.1_PE2H3 | cds-NP_013691.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:224497-225576:- | gene-YML021C_PE2H4 | rna-NM_001182379.1_PE2H4 | cds-NP_013691.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:229734-230813:- | gene-YML021C_S288C | rna-NM_001182379.1_S288C | cds-NP_013691.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000088.1:8040-9119:+ | gene-YML021C_SA1 | rna-NM_001182379.1_SA1 | cds-NP_013691.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:212339-213418:- | gene-YML021C_ThermosaccDry | rna-NM_001182379.1_ThermosaccDry | cds-NP_013691.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:216343-217422:- | gene-YML021C_VR1 | rna-NM_001182379.1_VR1 | cds-NP_013691.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:191393-192472:- | gene-YML021C_ZTW1 | rna-NM_001182379.1_ZTW1 | cds-NP_013691.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:223101-224180:- | gene-YML021C_Sparadoxus | rna-NM_001182379.1_Sparadoxus | cds-NP_013691.1_Sparadoxus | 89.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |