Gene name: ULP2
Reference locus (S288C): YIL031W
Gene biotype: protein_coding
Description: Ubiquitin-like-specific protease 2; Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins; plays a role in chromosome cohesion at centromeric regions and recovery from checkpoint arrest induced by DNA damage or DNA replication defects; potential Cdc28p substrate; human homolog PML implicated in promyelocytic leukemia can partially complement yeast null mutant
Top 10 interactors (score): SMT3 (0.999); UBC9 (0.997); MMS21 (0.981); UBA2 (0.981); NFI1 (0.98); CSM1 (0.98); SIZ1 (0.979); AOS1 (0.972); SLX5 (0.926); CST9 (0.918); ULP1 (0.916); TOP2 (0.916); SCC2 (0.902); RFA1 (0.889); SLX8 (0.877); MOT1 (0.837); SMC5 (0.815); WSS1 (0.787); CDC5 (0.778); SRS2 (0.775)
Homologues (species, bitscore): SENP7 (Homo sapiens, 87.0); Senp7 (Mus musculus, 83.2); senp7 (Danio rerio, 94.4); senp1 (Xenopus tropicalis, 89.7); CG12717 (Drosophila melanogaster, 107.1); ulp-1 (Caenorhabditis elegans, 77.4); AT4G33620 (Arabidopsis thaliana, 84.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:289462-292572:+ | gene-YIL031W_AKU4011 | rna-NM_001179381.1_AKU4011 | cds-NP_012233.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:150913-154017:+ | gene-YIL031W_BG1 | rna-NM_001179381.1_BG1 | cds-NP_012233.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:295732-298836:+ | gene-YIL031W_Bruggeman | rna-NM_001179381.1_Bruggeman | cds-NP_012233.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:283648-286752:+ | gene-YIL031W_CAT1 | rna-NM_001179381.1_CAT1 | cds-NP_012233.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:289290-292412:+ | gene-YIL031W_CBS1585 | rna-NM_001179381.1_CBS1585 | cds-NP_012233.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:284611-287715:+ | gene-YIL031W_CBS436 | rna-NM_001179381.1_CBS436 | cds-NP_012233.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:285905-289027:+ | gene-YIL031W_CBS6412 | rna-NM_001179381.1_CBS6412 | cds-NP_012233.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:281453-284575:+ | gene-YIL031W_CBS6413 | rna-NM_001179381.1_CBS6413 | cds-NP_012233.1_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:284542-287646:+ | gene-YIL031W_CENPK1137D | rna-NM_001179381.1_CENPK1137D | cds-NP_012233.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:273376-276498:+ | gene-YIL031W_EthanolRed | rna-NM_001179381.1_EthanolRed | cds-NP_012233.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:290915-294037:+ | gene-YIL031W_FaliES1 | rna-NM_001179381.1_FaliES1 | cds-NP_012233.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:4850-7954:- | gene-YIL031W_JAY291 | rna-NM_001179381.1_JAY291 | cds-NP_012233.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:292582-295686:+ | gene-YIL031W_MUCL30387 | rna-NM_001179381.1_MUCL30387 | cds-NP_012233.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:289185-292289:+ | gene-YIL031W_MUCL30388 | rna-NM_001179381.1_MUCL30388 | cds-NP_012233.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:290130-293252:+ | gene-YIL031W_MUCL39482 | rna-NM_001179381.1_MUCL39482 | cds-NP_012233.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:293272-296376:+ | gene-YIL031W_MUCL42920 | rna-NM_001179381.1_MUCL42920 | cds-NP_012233.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:292633-295737:+ | gene-YIL031W_NCIM3186 | rna-NM_001179381.1_NCIM3186 | cds-NP_012233.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:294403-297525:+ | gene-YIL031W_NCYC1407 | rna-NM_001179381.1_NCYC1407 | cds-NP_012233.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:287664-290786:+ | gene-YIL031W_PE2H3 | rna-NM_001179381.1_PE2H3 | cds-NP_012233.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:282370-285492:+ | gene-YIL031W_PE2H4 | rna-NM_001179381.1_PE2H4 | cds-NP_012233.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:292633-295737:+ | gene-YIL031W_S288C | rna-NM_001179381.1_S288C | cds-NP_012233.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:30421-33525:- | gene-YIL031W_SA1 | rna-NM_001179381.1_SA1 | cds-NP_012233.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:289584-292706:+ | gene-YIL031W_ThermosaccDry | rna-NM_001179381.1_ThermosaccDry | cds-NP_012233.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:287021-290374:+ | gene-YIL031W_VR1 | rna-NM_001179381.1_VR1 | cds-NP_012233.1_VR1 | 92.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:263436-266540:+ | gene-YIL031W_ZTW1 | rna-NM_001179381.1_ZTW1 | cds-NP_012233.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:285473-288610:+ | gene-YIL031W_Sparadoxus | rna-NM_001179381.1_Sparadoxus | cds-NP_012233.1_Sparadoxus | 85.3 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |