Gene name: ULP1
Reference locus (S288C): YPL020C
Gene biotype: protein_coding
Description: Ubiquitin-like-specific protease 1; Protease that specifically cleaves Smt3p protein conjugates; required for cell cycle progression; associates with nucleoporins and may interact with septin rings during telophase; sequestered to the nucleolus under stress conditions
Top 10 interactors (score): SMT3 (0.999); PSE1 (0.997); SRP1 (0.997); RNA1 (0.993); UBC9 (0.993); UBA2 (0.992); KAP95 (0.988); AOS1 (0.985); NFI1 (0.98); SIZ1 (0.977); MMS21 (0.962); NUP60 (0.96); MLP2 (0.955); GRC3 (0.93); IPI3 (0.918); ULP2 (0.916); SLX5 (0.914); EBP2 (0.912); LAS1 (0.912); NUG1 (0.901)
Homologues (species, bitscore): SENP1 (Homo sapiens, 116.3); Senp1 (Mus musculus, 114.8); SENP1 (Danio rerio, 116.7); senp1 (Xenopus tropicalis, 120.6); Ulp1 (Drosophila melanogaster, 121.7); ulp-1 (Caenorhabditis elegans, 112.8); ULP1A (Arabidopsis thaliana, 100.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:483802-485667:- | gene-YPL020C_AKU4011 | rna-NM_001183834.1_AKU4011 | cds-NP_015305.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:411677-413542:+ | gene-YPL020C_BG1 | rna-NM_001183834.1_BG1 | cds-NP_015305.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:560751-562616:- | gene-YPL020C_Bruggeman | rna-NM_001183834.1_Bruggeman | cds-NP_015305.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:600415-602280:- | gene-YPL020C_CAT1 | rna-NM_001183834.1_CAT1 | cds-NP_015305.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:487874-489739:- | gene-YPL020C_CBS1585 | rna-NM_001183834.1_CBS1585 | cds-NP_015305.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:502001-503866:- | gene-YPL020C_CBS436 | rna-NM_001183834.1_CBS436 | cds-NP_015305.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:492065-493930:- | gene-YPL020C_CBS6412 | rna-NM_001183834.1_CBS6412 | cds-NP_015305.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:484427-486292:- | gene-YPL020C_CBS6413 | rna-NM_001183834.1_CBS6413 | cds-NP_015305.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:512274-514139:- | gene-YPL020C_CENPK1137D | rna-NM_001183834.1_CENPK1137D | cds-NP_015305.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:482166-484031:- | gene-YPL020C_EthanolRed | rna-NM_001183834.1_EthanolRed | cds-NP_015305.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:489996-491861:- | gene-YPL020C_FaliES1 | rna-NM_001183834.1_FaliES1 | cds-NP_015305.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:98597-100462:- | gene-YPL020C_JAY291 | rna-NM_001183834.1_JAY291 | cds-NP_015305.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:501699-503564:- | gene-YPL020C_MUCL30387 | rna-NM_001183834.1_MUCL30387 | cds-NP_015305.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:500807-502672:- | gene-YPL020C_MUCL30388 | rna-NM_001183834.1_MUCL30388 | cds-NP_015305.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:481192-483057:- | gene-YPL020C_MUCL39482 | rna-NM_001183834.1_MUCL39482 | cds-NP_015305.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:540319-542184:- | gene-YPL020C_MUCL42920 | rna-NM_001183834.1_MUCL42920 | cds-NP_015305.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:512296-514161:- | gene-YPL020C_NCIM3186 | rna-NM_001183834.1_NCIM3186 | cds-NP_015305.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:488469-490334:- | gene-YPL020C_NCYC1407 | rna-NM_001183834.1_NCYC1407 | cds-NP_015305.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:495125-496990:- | gene-YPL020C_PE2H3 | rna-NM_001183834.1_PE2H3 | cds-NP_015305.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:494740-496605:- | gene-YPL020C_PE2H4 | rna-NM_001183834.1_PE2H4 | cds-NP_015305.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:512313-514178:- | gene-YPL020C_S288C | rna-NM_001183834.1_S288C | cds-NP_015305.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000076.1:8990-10855:- | gene-YPL020C_SA1 | rna-NM_001183834.1_SA1 | cds-NP_015305.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:489795-491660:- | gene-YPL020C_ThermosaccDry | rna-NM_001183834.1_ThermosaccDry | cds-NP_015305.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:504682-506547:- | gene-YPL020C_VR1 | rna-NM_001183834.1_VR1 | cds-NP_015305.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:489081-490946:- | gene-YPL020C_ZTW1 | rna-NM_001183834.1_ZTW1 | cds-NP_015305.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:489021-490892:- | gene-YPL020C_Sparadoxus | rna-NM_001183834.1_Sparadoxus | cds-NP_015305.1_Sparadoxus | 88.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |