Gene name: UIP3
Reference locus (S288C): YAR027W
Gene biotype: protein_coding
Description: ULP1-interacting protein 3; Putative integral membrane protein of unknown function; interacts with Ulp1p at the nuclear periphery; member of DUP240 gene family; Belongs to the DUP/COS family
Top 10 interactors (score): YAR028W (0.969); PRM9 (0.772); ULP1 (0.759); ENV10 (0.711); GTT3 (0.711); UIP4 (0.71); YPR174C (0.7); TPO5 (0.698); VPS68 (0.645); ATP11 (0.645); PHS1 (0.645); TVP15 (0.645); VPS55 (0.645); TVP18 (0.645); YAR029W (0.626); MST28 (0.623); SLY41 (0.597); NBP1 (0.57); PRM3 (0.569); MPS2 (0.568)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:162925-163632:+ | gene-YAR027W_AKU4011 | rna-NM_001178221.1_AKU4011 | cds-NP_009414.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000206.1:7073-7780:- | gene-YAR027W_BG1 | rna-NM_001178221.1_BG1 | cds-NP_009414.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:179571-180278:+ | gene-YAR027W_Bruggeman | rna-NM_001178221.1_Bruggeman | cds-NP_009414.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:167190-167897:+ | gene-YAR027W_CAT1 | rna-NM_001178221.1_CAT1 | cds-NP_009414.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:175624-176331:+ | gene-YAR027W_CBS1585 | rna-NM_001178221.1_CBS1585 | cds-NP_009414.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:176287-176994:+ | gene-YAR027W_CBS436 | rna-NM_001178221.1_CBS436 | cds-NP_009414.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:396903-397607:+ | gene-YAR027W_CBS6412 | rna-NM_001178221.1_CBS6412 | cds-NP_009414.1_CBS6412 | 74.1 | 96.4 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | MBVP01000050.1:373-1080:+ | gene-YAR027W_CBS6413 | rna-NM_001178221.1_CBS6413 | cds-NP_009414.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:183681-184388:+ | gene-YAR027W_CENPK1137D | rna-NM_001178221.1_CENPK1137D | cds-NP_009414.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | MBWB01000005.1:151-858:+ | gene-YAR027W_EthanolRed | rna-NM_001178221.1_EthanolRed | cds-NP_009414.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | MBWD01000033.1:1712-2419:- | gene-YAR027W_FaliES1 | rna-NM_001178221.1_FaliES1 | cds-NP_009414.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000270.1:2930-3637:- | gene-YAR027W_JAY291 | rna-NM_001178221.1_JAY291 | cds-NP_009414.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:183063-183770:+ | gene-YAR027W_MUCL30387 | rna-NM_001178221.1_MUCL30387 | cds-NP_009414.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:180112-180819:+ | gene-YAR027W_MUCL30388 | rna-NM_001178221.1_MUCL30388 | cds-NP_009414.1_MUCL30388 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000223.1:152-859:+ | gene-YAR027W_MUCL42920 | rna-NM_001178221.1_MUCL42920 | cds-NP_009414.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:183647-184354:+ | gene-YAR027W_NCIM3186 | rna-NM_001178221.1_NCIM3186 | cds-NP_009414.1_NCIM3186 | 45.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | MBVM01000054.1:1795-2499:- | gene-YAR027W_NCYC1407 | rna-NM_001178221.1_NCYC1407 | cds-NP_009414.1_NCYC1407 | 70.2 | 95.1 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:171155-171862:+ | gene-YAR027W_PE2H3 | rna-NM_001178221.1_PE2H3 | cds-NP_009414.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:170874-171581:+ | gene-YAR027W_PE2H4 | rna-NM_001178221.1_PE2H4 | cds-NP_009414.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:183770-184477:+ | gene-YAR027W_S288C | rna-NM_001178221.1_S288C | cds-NP_009414.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000130.1:2467-3171:+ | gene-YAR027W_SA1 | rna-NM_001178221.1_SA1 | cds-NP_009414.1_SA1 | 73.4 | 96.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | MBWA01000081.1:175-882:+ | gene-YAR027W_ThermosaccDry | rna-NM_001178221.1_ThermosaccDry | cds-NP_009414.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:187632-188339:+ | gene-YAR027W_VR1 | rna-NM_001178221.1_VR1 | cds-NP_009414.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:150303-151010:+ | gene-YAR027W_ZTW1 | rna-NM_001178221.1_ZTW1 | cds-NP_009414.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:168763-169458:+ | gene-YAR027W_Sparadoxus | rna-NM_001178221.1_Sparadoxus | cds-NP_009414.1_Sparadoxus | 82.7 | 98.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |