Gene name: UGA4
Reference locus (S288C): YDL210W
Gene biotype: protein_coding
Description: GABA (gamma-aminobutyrate) permease; serves as a GABA transport protein involved in the utilization of GABA as a nitrogen source; catalyzes the transport of putrescine and delta-aminolevulinic acid (ALA); localized to the vacuolar membrane; Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid/choline transporter (ACT) (TC 2.A.3.4) family
Top 10 interactors (score): UGA3 (0.919); PUT4 (0.893); UGA1 (0.879); UGA2 (0.867); DAL80 (0.858); DAL81 (0.846); DAL5 (0.801); GAD1 (0.798); GAP1 (0.781); SCT1 (0.78); DUR3 (0.764); GLN3 (0.746); DAL3 (0.744); YML131W (0.724); PUT1 (0.723); GZF3 (0.699); BAP3 (0.693); AVT7 (0.693); DUR1,2 (0.676); DAL4 (0.616)
Homologues (species, bitscore): SLC7A1 (Homo sapiens, 62.4); Slc7a1 (Mus musculus, 61.2); zgc:175280 (Danio rerio, 77.8); slc7a1 (Xenopus tropicalis, 65.5); CG5535 (Drosophila melanogaster, 67.0); F23F1.6 (Caenorhabditis elegans, 50.8); GABP (Arabidopsis thaliana, 223.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:67755-69470:+ | gene-YDL210W_AKU4011 | rna-NM_001180270.1_AKU4011 | cds-NP_010071.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000101.1:929-2644:+ | gene-YDL210W_BG1 | rna-NM_001180270.1_BG1 | cds-NP_010071.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:84145-85860:+ | gene-YDL210W_Bruggeman | rna-NM_001180270.1_Bruggeman | cds-NP_010071.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:86257-87972:+ | gene-YDL210W_CAT1 | rna-NM_001180270.1_CAT1 | cds-NP_010071.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:66607-68322:+ | gene-YDL210W_CBS1585 | rna-NM_001180270.1_CBS1585 | cds-NP_010071.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:281510-283225:+ | gene-YDL210W_CBS436 | rna-NM_001180270.1_CBS436 | cds-NP_010071.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:66719-68434:+ | gene-YDL210W_CBS6412 | rna-NM_001180270.1_CBS6412 | cds-NP_010071.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:84265-85980:+ | gene-YDL210W_CBS6413 | rna-NM_001180270.1_CBS6413 | cds-NP_010071.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:82936-84651:+ | gene-YDL210W_CENPK1137D | rna-NM_001180270.1_CENPK1137D | cds-NP_010071.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:80403-82118:+ | gene-YDL210W_EthanolRed | rna-NM_001180270.1_EthanolRed | cds-NP_010071.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:85008-86723:+ | gene-YDL210W_FaliES1 | rna-NM_001180270.1_FaliES1 | cds-NP_010071.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000344.1:32529-34244:- | gene-YDL210W_JAY291 | rna-NM_001180270.1_JAY291 | cds-NP_010071.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:82378-84093:+ | gene-YDL210W_MUCL30387 | rna-NM_001180270.1_MUCL30387 | cds-NP_010071.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:71949-73664:+ | gene-YDL210W_MUCL30388 | rna-NM_001180270.1_MUCL30388 | cds-NP_010071.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:67450-69165:+ | gene-YDL210W_MUCL39482 | rna-NM_001180270.1_MUCL39482 | cds-NP_010071.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:83529-85244:+ | gene-YDL210W_MUCL42920 | rna-NM_001180270.1_MUCL42920 | cds-NP_010071.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:84193-85908:+ | gene-YDL210W_NCIM3186 | rna-NM_001180270.1_NCIM3186 | cds-NP_010071.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:67406-69121:+ | gene-YDL210W_NCYC1407 | rna-NM_001180270.1_NCYC1407 | cds-NP_010071.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:75149-76864:+ | gene-YDL210W_PE2H3 | rna-NM_001180270.1_PE2H3 | cds-NP_010071.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:75159-76874:+ | gene-YDL210W_PE2H4 | rna-NM_001180270.1_PE2H4 | cds-NP_010071.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:84270-85985:+ | gene-YDL210W_S288C | rna-NM_001180270.1_S288C | cds-NP_010071.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000126.1:839-2554:+ | gene-YDL210W_SA1 | rna-NM_001180270.1_SA1 | cds-NP_010071.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:84772-86487:+ | gene-YDL210W_ThermosaccDry | rna-NM_001180270.1_ThermosaccDry | cds-NP_010071.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:85724-87439:+ | gene-YDL210W_VR1 | rna-NM_001180270.1_VR1 | cds-NP_010071.1_VR1 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:83451-85166:+ | gene-YDL210W_ZTW1 | rna-NM_001180270.1_ZTW1 | cds-NP_010071.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:86783-88498:+ | gene-YDL210W_Sparadoxus | rna-NM_001180270.1_Sparadoxus | cds-NP_010071.1_Sparadoxus | 92.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |