Gene name: UGA3
Reference locus (S288C): YDL170W
Gene biotype: protein_coding
Description: Transcriptional activator for GABA-dependent induction of GABA genes; binds to DNA elements found in the promoters of target genes and increases their expression in the presence of GABA (gamma-aminobutyrate); zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type; localized to the nucleus; examples of GABA genes include UGA1, UGA2, and UGA4
Top 10 interactors (score): DAL81 (0.972); UGA4 (0.919); UGA1 (0.906); UGA2 (0.906); GAD1 (0.85); DAL80 (0.816); GDH2 (0.79); CMD1 (0.785); GLN3 (0.744); LEU3 (0.714); DAL82 (0.691); YML119W (0.671); GZF3 (0.575); BAP3 (0.574); BAP2 (0.573); PPR1 (0.562); STP1 (0.559); YER039C-A (0.54); PUT4 (0.526); UGX2 (0.525)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:140734-142320:+ | gene-YDL170W_AKU4011 | rna-NM_001180230.1_AKU4011 | cds-NP_010111.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:407411-408997:- | gene-YDL170W_BG1 | rna-NM_001180230.1_BG1 | cds-NP_010111.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:156795-158381:+ | gene-YDL170W_Bruggeman | rna-NM_001180230.1_Bruggeman | cds-NP_010111.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:155105-156692:+ | gene-YDL170W_CAT1 | rna-NM_001180230.1_CAT1 | cds-NP_010111.1_CAT1 | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:138771-140357:+ | gene-YDL170W_CBS1585 | rna-NM_001180230.1_CBS1585 | cds-NP_010111.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:155729-157315:+ | gene-YDL170W_CBS436 | rna-NM_001180230.1_CBS436 | cds-NP_010111.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:138386-139972:+ | gene-YDL170W_CBS6412 | rna-NM_001180230.1_CBS6412 | cds-NP_010111.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:157197-158783:+ | gene-YDL170W_CBS6413 | rna-NM_001180230.1_CBS6413 | cds-NP_010111.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:154991-156577:+ | gene-YDL170W_CENPK1137D | rna-NM_001180230.1_CENPK1137D | cds-NP_010111.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:152198-153784:+ | gene-YDL170W_EthanolRed | rna-NM_001180230.1_EthanolRed | cds-NP_010111.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:157524-159110:+ | gene-YDL170W_FaliES1 | rna-NM_001180230.1_FaliES1 | cds-NP_010111.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000032.1:60456-62043:- | gene-YDL170W_JAY291 | rna-NM_001180230.1_JAY291 | cds-NP_010111.1_JAY291 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:155091-156677:+ | gene-YDL170W_MUCL30387 | rna-NM_001180230.1_MUCL30387 | cds-NP_010111.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:146740-148326:+ | gene-YDL170W_MUCL30388 | rna-NM_001180230.1_MUCL30388 | cds-NP_010111.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:139914-141500:+ | gene-YDL170W_MUCL39482 | rna-NM_001180230.1_MUCL39482 | cds-NP_010111.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000307.1:27873-29459:- | gene-YDL170W_MUCL42920 | rna-NM_001180230.1_MUCL42920 | cds-NP_010111.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:156241-157827:+ | gene-YDL170W_NCIM3186 | rna-NM_001180230.1_NCIM3186 | cds-NP_010111.1_NCIM3186 | 96.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:139854-141440:+ | gene-YDL170W_NCYC1407 | rna-NM_001180230.1_NCYC1407 | cds-NP_010111.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:147092-148679:+ | gene-YDL170W_PE2H3 | rna-NM_001180230.1_PE2H3 | cds-NP_010111.1_PE2H3 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:147096-148683:+ | gene-YDL170W_PE2H4 | rna-NM_001180230.1_PE2H4 | cds-NP_010111.1_PE2H4 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:156318-157904:+ | gene-YDL170W_S288C | rna-NM_001180230.1_S288C | cds-NP_010111.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000043.1:21869-23455:+ | gene-YDL170W_SA1 | rna-NM_001180230.1_SA1 | cds-NP_010111.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:157284-158870:+ | gene-YDL170W_ThermosaccDry | rna-NM_001180230.1_ThermosaccDry | cds-NP_010111.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:157863-159450:+ | gene-YDL170W_VR1 | rna-NM_001180230.1_VR1 | cds-NP_010111.1_VR1 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:155413-156999:+ | gene-YDL170W_ZTW1 | rna-NM_001180230.1_ZTW1 | cds-NP_010111.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:157590-159179:+ | gene-YDL170W_Sparadoxus | rna-NM_001180230.1_Sparadoxus | cds-NP_010111.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |