Gene name: UGA2
Reference locus (S288C): YBR006W
Gene biotype: protein_coding
Description: Succinate-semialdehyde dehydrogenase [NADP(+)]; Succinate semialdehyde dehydrogenase; involved in the utilization of gamma-aminobutyrate (GABA) as a nitrogen source; part of the 4-aminobutyrate and glutamate degradation pathways; localized to the cytoplasm
Top 10 interactors (score): UGA1 (0.999); GAD1 (0.951); UGA3 (0.906); GDH2 (0.878); MDH2 (0.877); UGA4 (0.867); FUM1 (0.865); CIT1 (0.864); CIT2 (0.859); SDH2 (0.859); PUT1 (0.854); CIT3 (0.849); MDH1 (0.835); SDH4 (0.835); KGD1 (0.835); MDH3 (0.835); SDH1 (0.822); SHH4 (0.822); YJL045W (0.822); SDH3 (0.821)
Homologues (species, bitscore): ALDH5A1 (Homo sapiens, 456.8); Aldh5a1 (Mus musculus, 456.8); aldh5a1 (Danio rerio, 468.0); aldh5a1 (Xenopus tropicalis, 476.1); Ssadh (Drosophila melanogaster, 443.7); alh-7 (Caenorhabditis elegans, 421.0); ALDH5F1 (Arabidopsis thaliana, 471.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:235397-236890:+ | gene-YBR006W_AKU4011 | rna-NM_001178354.1_AKU4011 | cds-NP_009560.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:225506-226999:+ | gene-YBR006W_BG1 | rna-NM_001178354.1_BG1 | cds-NP_009560.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:236103-237596:+ | gene-YBR006W_Bruggeman | rna-NM_001178354.1_Bruggeman | cds-NP_009560.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:238388-239881:+ | gene-YBR006W_CAT1 | rna-NM_001178354.1_CAT1 | cds-NP_009560.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:227435-228928:+ | gene-YBR006W_CBS1585 | rna-NM_001178354.1_CBS1585 | cds-NP_009560.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:235678-237171:+ | gene-YBR006W_CBS436 | rna-NM_001178354.1_CBS436 | cds-NP_009560.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:325935-327428:+ | gene-YBR006W_CBS6412 | rna-NM_001178354.1_CBS6412 | cds-NP_009560.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:232800-234293:+ | gene-YBR006W_CBS6413 | rna-NM_001178354.1_CBS6413 | cds-NP_009560.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:246698-248191:+ | gene-YBR006W_CENPK1137D | rna-NM_001178354.1_CENPK1137D | cds-NP_009560.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:362394-363887:+ | gene-YBR006W_EthanolRed | rna-NM_001178354.1_EthanolRed | cds-NP_009560.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:250490-251983:+ | gene-YBR006W_FaliES1 | rna-NM_001178354.1_FaliES1 | cds-NP_009560.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000048.1:45615-47108:- | gene-YBR006W_JAY291 | rna-NM_001178354.1_JAY291 | cds-NP_009560.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:236458-237951:+ | gene-YBR006W_MUCL30387 | rna-NM_001178354.1_MUCL30387 | cds-NP_009560.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:236401-237894:+ | gene-YBR006W_MUCL30388 | rna-NM_001178354.1_MUCL30388 | cds-NP_009560.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:227416-228909:+ | gene-YBR006W_MUCL39482 | rna-NM_001178354.1_MUCL39482 | cds-NP_009560.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:234857-236350:+ | gene-YBR006W_MUCL42920 | rna-NM_001178354.1_MUCL42920 | cds-NP_009560.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:246807-248300:+ | gene-YBR006W_NCIM3186 | rna-NM_001178354.1_NCIM3186 | cds-NP_009560.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:228591-230084:+ | gene-YBR006W_NCYC1407 | rna-NM_001178354.1_NCYC1407 | cds-NP_009560.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:240751-242244:+ | gene-YBR006W_PE2H3 | rna-NM_001178354.1_PE2H3 | cds-NP_009560.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:238419-239912:+ | gene-YBR006W_PE2H4 | rna-NM_001178354.1_PE2H4 | cds-NP_009560.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:247010-248503:+ | gene-YBR006W_S288C | rna-NM_001178354.1_S288C | cds-NP_009560.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:54268-55761:- | gene-YBR006W_SA1 | rna-NM_001178354.1_SA1 | cds-NP_009560.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:250199-251692:+ | gene-YBR006W_ThermosaccDry | rna-NM_001178354.1_ThermosaccDry | cds-NP_009560.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:232094-233587:+ | gene-YBR006W_VR1 | rna-NM_001178354.1_VR1 | cds-NP_009560.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:226183-227676:+ | gene-YBR006W_ZTW1 | rna-NM_001178354.1_ZTW1 | cds-NP_009560.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:261869-263362:+ | gene-YBR006W_Sparadoxus | rna-NM_001178354.1_Sparadoxus | cds-NP_009560.1_Sparadoxus | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |