Gene name: UGA1
Reference locus (S288C): YGR019W
Gene biotype: protein_coding
Description: 4-aminobutyrate aminotransferase; Gamma-aminobutyrate (GABA) transaminase; also known as 4-aminobutyrate aminotransferase; involved in the 4-aminobutyrate and glutamate degradation pathways; required for normal oxidative stress tolerance and nitrogen utilization; protein abundance increases in response to DNA replication stress; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Top 10 interactors (score): GAD1 (0.999); UGA2 (0.999); TFS1 (0.988); ALD4 (0.975); ALD6 (0.972); MXR1 (0.97); YNK1 (0.969); ALD3 (0.968); ACO1 (0.968); YFR006W (0.967); FUM1 (0.963); TPI1 (0.963); ALD2 (0.961); ALD5 (0.958); HFD1 (0.951); PGM2 (0.911); AAT1 (0.91); GDH2 (0.908); UGA3 (0.906); PAN6 (0.903)
Homologues (species, bitscore): ABAT (Homo sapiens, 389.4); Abat (Mus musculus, 391.7); abat (Danio rerio, 397.5); abat (Xenopus tropicalis, 384.4); CG7433 (Drosophila melanogaster, 426.4); gta-1 (Caenorhabditis elegans, 399.1); AGT2 (Arabidopsis thaliana, 97.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:527073-528488:+ | gene-YGR019W_AKU4011 | rna-NM_001181148.3_AKU4011 | cds-NP_011533.3_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:47421-48836:- | gene-YGR019W_BG1 | rna-NM_001181148.3_BG1 | cds-NP_011533.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:528255-529670:+ | gene-YGR019W_Bruggeman | rna-NM_001181148.3_Bruggeman | cds-NP_011533.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:527035-528450:+ | gene-YGR019W_CAT1 | rna-NM_001181148.3_CAT1 | cds-NP_011533.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:528392-529807:+ | gene-YGR019W_CBS1585 | rna-NM_001181148.3_CBS1585 | cds-NP_011533.3_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:523138-524553:+ | gene-YGR019W_CBS436 | rna-NM_001181148.3_CBS436 | cds-NP_011533.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:521163-522578:+ | gene-YGR019W_CBS6412 | rna-NM_001181148.3_CBS6412 | cds-NP_011533.3_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:525242-526657:+ | gene-YGR019W_CBS6413 | rna-NM_001181148.3_CBS6413 | cds-NP_011533.3_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:525047-526462:+ | gene-YGR019W_CENPK1137D | rna-NM_001181148.3_CENPK1137D | cds-NP_011533.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:515265-516680:+ | gene-YGR019W_EthanolRed | rna-NM_001181148.3_EthanolRed | cds-NP_011533.3_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:518515-519930:+ | gene-YGR019W_FaliES1 | rna-NM_001181148.3_FaliES1 | cds-NP_011533.3_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000020.1:57425-58840:+ | gene-YGR019W_JAY291 | rna-NM_001181148.3_JAY291 | cds-NP_011533.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:525482-526897:+ | gene-YGR019W_MUCL30387 | rna-NM_001181148.3_MUCL30387 | cds-NP_011533.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:528024-529439:+ | gene-YGR019W_MUCL30388 | rna-NM_001181148.3_MUCL30388 | cds-NP_011533.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:524220-525635:+ | gene-YGR019W_MUCL39482 | rna-NM_001181148.3_MUCL39482 | cds-NP_011533.3_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:533965-535380:+ | gene-YGR019W_MUCL42920 | rna-NM_001181148.3_MUCL42920 | cds-NP_011533.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:525229-526644:+ | gene-YGR019W_NCIM3186 | rna-NM_001181148.3_NCIM3186 | cds-NP_011533.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:518403-519818:+ | gene-YGR019W_NCYC1407 | rna-NM_001181148.3_NCYC1407 | cds-NP_011533.3_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:521296-522711:+ | gene-YGR019W_PE2H3 | rna-NM_001181148.3_PE2H3 | cds-NP_011533.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:526346-527761:+ | gene-YGR019W_PE2H4 | rna-NM_001181148.3_PE2H4 | cds-NP_011533.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:525229-526644:+ | gene-YGR019W_S288C | rna-NM_001181148.3_S288C | cds-NP_011533.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:29058-30473:- | gene-YGR019W_SA1 | rna-NM_001181148.3_SA1 | cds-NP_011533.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:537841-539256:+ | gene-YGR019W_ThermosaccDry | rna-NM_001181148.3_ThermosaccDry | cds-NP_011533.3_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:628514-629929:+ | gene-YGR019W_VR1 | rna-NM_001181148.3_VR1 | cds-NP_011533.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:516767-518182:+ | gene-YGR019W_ZTW1 | rna-NM_001181148.3_ZTW1 | cds-NP_011533.3_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:526162-527577:+ | gene-YGR019W_Sparadoxus | rna-NM_001181148.3_Sparadoxus | cds-NP_011533.3_Sparadoxus | 92.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |