Gene name: UCC1
Reference locus (S288C): YLR224W
Gene biotype: protein_coding
Description: F-box protein and component of SCF ubiquitin ligase complexes; involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; SCF-Ucc1 regulates level of Cit2 citrate synthase protein to maintain citrate homeostasis, acts as metabolic switch for glyoxylate cycle; UCC1 transcription is downregulated in cells grown on C2-compounds
Top 10 interactors (score): HRT3 (0.895); YDR306C (0.775); YLR352W (0.76); SKP1 (0.707); ROY1 (0.697); COS111 (0.695); SAF1 (0.692); ELA1 (0.617); GET2 (0.586); HRT1 (0.577); SEC28 (0.573); CDC4 (0.573); YKL118W (0.571); YBL094C (0.566); SNT2 (0.566); GET1 (0.539); SSL1 (0.525); STE5 (0.497); DIA2 (0.497); YDR157W (0.497)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:540610-541719:+ | gene-YLR224W_AKU4011 | rna-NM_001182111.1_AKU4011 | cds-NP_013325.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000082.1:546-1655:+ | gene-YLR224W_BG1 | rna-NM_001182111.1_BG1 | cds-NP_013325.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:580832-581941:+ | gene-YLR224W_Bruggeman | rna-NM_001182111.1_Bruggeman | cds-NP_013325.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:580481-581590:+ | gene-YLR224W_CAT1 | rna-NM_001182111.1_CAT1 | cds-NP_013325.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:576104-577213:+ | gene-YLR224W_CBS1585 | rna-NM_001182111.1_CBS1585 | cds-NP_013325.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:566299-567408:+ | gene-YLR224W_CBS436 | rna-NM_001182111.1_CBS436 | cds-NP_013325.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:544665-545774:+ | gene-YLR224W_CBS6412 | rna-NM_001182111.1_CBS6412 | cds-NP_013325.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:576399-577508:+ | gene-YLR224W_CBS6413 | rna-NM_001182111.1_CBS6413 | cds-NP_013325.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:571180-572289:+ | gene-YLR224W_CENPK1137D | rna-NM_001182111.1_CENPK1137D | cds-NP_013325.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:540124-541233:+ | gene-YLR224W_EthanolRed | rna-NM_001182111.1_EthanolRed | cds-NP_013325.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:569049-570158:+ | gene-YLR224W_FaliES1 | rna-NM_001182111.1_FaliES1 | cds-NP_013325.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:95970-97079:+ | gene-YLR224W_JAY291 | rna-NM_001182111.1_JAY291 | cds-NP_013325.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:581692-582801:+ | gene-YLR224W_MUCL30387 | rna-NM_001182111.1_MUCL30387 | cds-NP_013325.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:585812-586921:+ | gene-YLR224W_MUCL30388 | rna-NM_001182111.1_MUCL30388 | cds-NP_013325.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:577085-578194:+ | gene-YLR224W_MUCL39482 | rna-NM_001182111.1_MUCL39482 | cds-NP_013325.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:577582-578691:+ | gene-YLR224W_MUCL42920 | rna-NM_001182111.1_MUCL42920 | cds-NP_013325.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:586438-587547:+ | gene-YLR224W_NCIM3186 | rna-NM_001182111.1_NCIM3186 | cds-NP_013325.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:569503-570612:+ | gene-YLR224W_NCYC1407 | rna-NM_001182111.1_NCYC1407 | cds-NP_013325.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:573773-574882:+ | gene-YLR224W_PE2H3 | rna-NM_001182111.1_PE2H3 | cds-NP_013325.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:573517-574626:+ | gene-YLR224W_PE2H4 | rna-NM_001182111.1_PE2H4 | cds-NP_013325.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:586464-587573:+ | gene-YLR224W_S288C | rna-NM_001182111.1_S288C | cds-NP_013325.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:88977-90086:- | gene-YLR224W_SA1 | rna-NM_001182111.1_SA1 | cds-NP_013325.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:571543-572652:+ | gene-YLR224W_ThermosaccDry | rna-NM_001182111.1_ThermosaccDry | cds-NP_013325.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:582887-583996:+ | gene-YLR224W_VR1 | rna-NM_001182111.1_VR1 | cds-NP_013325.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:95830-96939:+ | gene-YLR224W_ZTW1 | rna-NM_001182111.1_ZTW1 | cds-NP_013325.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:557692-558801:+ | gene-YLR224W_Sparadoxus | rna-NM_001182111.1_Sparadoxus | cds-NP_013325.1_Sparadoxus | 90.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |