Gene name: UBS1
Reference locus (S288C): YBR165W
Gene biotype: protein_coding
Description: Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p; functions as a general positive regulator of Cdc34p activity; nuclear protein that may represent a link between nucleocytoplasmic transport and ubiquitin ligase activity
Top 10 interactors (score): CDC34 (0.803); YFR045W (0.775); YRB1 (0.712); BIO4 (0.672); ROT2 (0.616); BIO3 (0.573); HIS2 (0.499); TYR1 (0.481); VPS41 (0.45); YNL179C (0.45); RGD2 (0.431)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:551725-552558:+ | gene-YBR165W_AKU4011 | rna-NM_001178513.1_AKU4011 | cds-NP_009724.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:542237-543070:+ | gene-YBR165W_BG1 | rna-NM_001178513.1_BG1 | cds-NP_009724.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:554748-555581:+ | gene-YBR165W_Bruggeman | rna-NM_001178513.1_Bruggeman | cds-NP_009724.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:448864-449697:+ | gene-YBR165W_CAT1 | rna-NM_001178513.1_CAT1 | cds-NP_009724.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:543508-544341:+ | gene-YBR165W_CBS1585 | rna-NM_001178513.1_CBS1585 | cds-NP_009724.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:551590-552423:+ | gene-YBR165W_CBS436 | rna-NM_001178513.1_CBS436 | cds-NP_009724.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:640991-641824:+ | gene-YBR165W_CBS6412 | rna-NM_001178513.1_CBS6412 | cds-NP_009724.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:549063-549896:+ | gene-YBR165W_CBS6413 | rna-NM_001178513.1_CBS6413 | cds-NP_009724.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:562652-563485:+ | gene-YBR165W_CENPK1137D | rna-NM_001178513.1_CENPK1137D | cds-NP_009724.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:677571-678404:+ | gene-YBR165W_EthanolRed | rna-NM_001178513.1_EthanolRed | cds-NP_009724.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:567803-568636:+ | gene-YBR165W_FaliES1 | rna-NM_001178513.1_FaliES1 | cds-NP_009724.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000310.1:7633-8466:+ | gene-YBR165W_JAY291 | rna-NM_001178513.1_JAY291 | cds-NP_009724.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:556402-557235:+ | gene-YBR165W_MUCL30387 | rna-NM_001178513.1_MUCL30387 | cds-NP_009724.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:555687-556520:+ | gene-YBR165W_MUCL30388 | rna-NM_001178513.1_MUCL30388 | cds-NP_009724.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:541880-542713:+ | gene-YBR165W_MUCL39482 | rna-NM_001178513.1_MUCL39482 | cds-NP_009724.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:551803-552636:+ | gene-YBR165W_MUCL42920 | rna-NM_001178513.1_MUCL42920 | cds-NP_009724.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:568649-569482:+ | gene-YBR165W_NCIM3186 | rna-NM_001178513.1_NCIM3186 | cds-NP_009724.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:544448-545281:+ | gene-YBR165W_NCYC1407 | rna-NM_001178513.1_NCYC1407 | cds-NP_009724.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:557107-557940:+ | gene-YBR165W_PE2H3 | rna-NM_001178513.1_PE2H3 | cds-NP_009724.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:554783-555616:+ | gene-YBR165W_PE2H4 | rna-NM_001178513.1_PE2H4 | cds-NP_009724.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:568852-569685:+ | gene-YBR165W_S288C | rna-NM_001178513.1_S288C | cds-NP_009724.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:90100-90933:+ | gene-YBR165W_SA1 | rna-NM_001178513.1_SA1 | cds-NP_009724.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:566813-567646:+ | gene-YBR165W_ThermosaccDry | rna-NM_001178513.1_ThermosaccDry | cds-NP_009724.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:548260-549093:+ | gene-YBR165W_VR1 | rna-NM_001178513.1_VR1 | cds-NP_009724.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:541928-542761:+ | gene-YBR165W_ZTW1 | rna-NM_001178513.1_ZTW1 | cds-NP_009724.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:579271-580104:+ | gene-YBR165W_Sparadoxus | rna-NM_001178513.1_Sparadoxus | cds-NP_009724.1_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |