Gene name: UBP7
Reference locus (S288C): YIL156W
Gene biotype: protein_coding
Description: Ubiquitin carboxyl-terminal hydrolase 7/11; Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP7 has a paralog, UBP11, that arose from the whole genome duplication
Top 10 interactors (score): UBP13 (0.938); UBP9 (0.922); UBP11 (0.909); HSE1 (0.9); UBP2 (0.869); UBP6 (0.803); MYO3 (0.774); DUF1 (0.752); RSP5 (0.733); UBP1 (0.727); DOP1 (0.72); ART5 (0.716); UBP3 (0.705); SLA1 (0.606); YCH1 (0.578); YNL058C (0.574); RDL1 (0.573); SNA3 (0.573); MAL11 (0.57); MUP1 (0.568)
Homologues (species, bitscore): USP21 (Homo sapiens, 129.4); Usp21 (Mus musculus, 129.8); usp2a (Danio rerio, 119.8); usp2 (Xenopus tropicalis, 128.6); Usp8 (Drosophila melanogaster, 115.5); E01B7.1 (Caenorhabditis elegans, 104.4); UBP9 (Arabidopsis thaliana, 91.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:49299-52523:+ | gene-YIL156W_AKU4011 | rna-NM_001179504.1_AKU4011 | cds-NP_012110.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000174.1:84856-88074:- | gene-YIL156W_BG1 | rna-NM_001179504.1_BG1 | cds-NP_012110.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:52068-55292:+ | gene-YIL156W_Bruggeman | rna-NM_001179504.1_Bruggeman | cds-NP_012110.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:45875-49093:+ | gene-YIL156W_CAT1 | rna-NM_001179504.1_CAT1 | cds-NP_012110.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:49505-52729:+ | gene-YIL156W_CBS1585 | rna-NM_001179504.1_CBS1585 | cds-NP_012110.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:40656-43874:+ | gene-YIL156W_CBS436 | rna-NM_001179504.1_CBS436 | cds-NP_012110.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:47031-50255:+ | gene-YIL156W_CBS6412 | rna-NM_001179504.1_CBS6412 | cds-NP_012110.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:41187-44411:+ | gene-YIL156W_CBS6413 | rna-NM_001179504.1_CBS6413 | cds-NP_012110.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:39796-43011:+ | gene-YIL156W_CENPK1137D | rna-NM_001179504.1_CENPK1137D | cds-NP_012110.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:34832-38056:+ | gene-YIL156W_EthanolRed | rna-NM_001179504.1_EthanolRed | cds-NP_012110.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:50636-53860:+ | gene-YIL156W_FaliES1 | rna-NM_001179504.1_FaliES1 | cds-NP_012110.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000319.1:54500-57718:- | gene-YIL156W_JAY291 | rna-NM_001179504.1_JAY291 | cds-NP_012110.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:49825-53049:+ | gene-YIL156W_MUCL30387 | rna-NM_001179504.1_MUCL30387 | cds-NP_012110.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:49062-52286:+ | gene-YIL156W_MUCL30388 | rna-NM_001179504.1_MUCL30388 | cds-NP_012110.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:50428-53652:+ | gene-YIL156W_MUCL39482 | rna-NM_001179504.1_MUCL39482 | cds-NP_012110.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:53648-56872:+ | gene-YIL156W_MUCL42920 | rna-NM_001179504.1_MUCL42920 | cds-NP_012110.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:48091-51306:+ | gene-YIL156W_NCIM3186 | rna-NM_001179504.1_NCIM3186 | cds-NP_012110.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:54397-57621:+ | gene-YIL156W_NCYC1407 | rna-NM_001179504.1_NCYC1407 | cds-NP_012110.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:49013-52231:+ | gene-YIL156W_PE2H3 | rna-NM_001179504.1_PE2H3 | cds-NP_012110.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:42975-46193:+ | gene-YIL156W_PE2H4 | rna-NM_001179504.1_PE2H4 | cds-NP_012110.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:48091-51306:+ | gene-YIL156W_S288C | rna-NM_001179504.1_S288C | cds-NP_012110.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000050.1:26660-29884:+ | gene-YIL156W_SA1 | rna-NM_001179504.1_SA1 | cds-NP_012110.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:49245-52469:+ | gene-YIL156W_ThermosaccDry | rna-NM_001179504.1_ThermosaccDry | cds-NP_012110.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:46439-49657:+ | gene-YIL156W_VR1 | rna-NM_001179504.1_VR1 | cds-NP_012110.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:24226-27450:+ | gene-YIL156W_ZTW1 | rna-NM_001179504.1_ZTW1 | cds-NP_012110.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:42013-45216:+ | gene-YIL156W_Sparadoxus | rna-NM_001179504.1_Sparadoxus | cds-NP_012110.1_Sparadoxus | 89.1 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |