Gene name: UBC9
Reference locus (S288C): YDL064W
Gene biotype: protein_coding
Description: SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC)
Top 10 interactors (score): POL30 (0.999); AOS1 (0.999); MMS21 (0.999); SMT3 (0.999); SIZ1 (0.999); UBA2 (0.999); RNA1 (0.999); NFI1 (0.999); YRB1 (0.998); RAD52 (0.998); KAP122 (0.998); RAD51 (0.997); NUP2 (0.997); ULP2 (0.997); SMC5 (0.996); MMS2 (0.996); YRB2 (0.995); ULP1 (0.993); NSP1 (0.992); TOP2 (0.991)
Homologues (species, bitscore): UBE2I (Homo sapiens, 199.5); Ube2i (Mus musculus, 199.5); ube2i (Danio rerio, 201.1); ube2i (Xenopus tropicalis, 199.5); lwr (Drosophila melanogaster, 193.7); ubc-9 (Caenorhabditis elegans, 192.6); SCE1 (Arabidopsis thaliana, 205.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:322085-322668:+ | gene-YDL064W_AKU4011 | rna-NM_001180123.1_AKU4011 | cds-NP_010219.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:227379-227962:- | gene-YDL064W_BG1 | rna-NM_001180123.1_BG1 | cds-NP_010219.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:339869-340452:+ | gene-YDL064W_Bruggeman | rna-NM_001180123.1_Bruggeman | cds-NP_010219.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:336241-336824:+ | gene-YDL064W_CAT1 | rna-NM_001180123.1_CAT1 | cds-NP_010219.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:320338-320921:+ | gene-YDL064W_CBS1585 | rna-NM_001180123.1_CBS1585 | cds-NP_010219.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:337037-337620:+ | gene-YDL064W_CBS436 | rna-NM_001180123.1_CBS436 | cds-NP_010219.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:318426-319009:+ | gene-YDL064W_CBS6412 | rna-NM_001180123.1_CBS6412 | cds-NP_010219.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:338417-339000:+ | gene-YDL064W_CBS6413 | rna-NM_001180123.1_CBS6413 | cds-NP_010219.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:336307-336890:+ | gene-YDL064W_CENPK1137D | rna-NM_001180123.1_CENPK1137D | cds-NP_010219.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:332888-333471:+ | gene-YDL064W_EthanolRed | rna-NM_001180123.1_EthanolRed | cds-NP_010219.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:339135-339718:+ | gene-YDL064W_FaliES1 | rna-NM_001180123.1_FaliES1 | cds-NP_010219.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:109150-109733:+ | gene-YDL064W_JAY291 | rna-NM_001180123.1_JAY291 | cds-NP_010219.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:337260-337843:+ | gene-YDL064W_MUCL30387 | rna-NM_001180123.1_MUCL30387 | cds-NP_010219.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:328386-328969:+ | gene-YDL064W_MUCL30388 | rna-NM_001180123.1_MUCL30388 | cds-NP_010219.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:321442-322025:+ | gene-YDL064W_MUCL39482 | rna-NM_001180123.1_MUCL39482 | cds-NP_010219.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:243463-244046:+ | gene-YDL064W_MUCL42920 | rna-NM_001180123.1_MUCL42920 | cds-NP_010219.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:337410-337993:+ | gene-YDL064W_NCIM3186 | rna-NM_001180123.1_NCIM3186 | cds-NP_010219.1_NCIM3186 | 94.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:321466-322049:+ | gene-YDL064W_NCYC1407 | rna-NM_001180123.1_NCYC1407 | cds-NP_010219.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:328269-328852:+ | gene-YDL064W_PE2H3 | rna-NM_001180123.1_PE2H3 | cds-NP_010219.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:328269-328852:+ | gene-YDL064W_PE2H4 | rna-NM_001180123.1_PE2H4 | cds-NP_010219.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:337487-338070:+ | gene-YDL064W_S288C | rna-NM_001180123.1_S288C | cds-NP_010219.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:96864-97447:- | gene-YDL064W_SA1 | rna-NM_001180123.1_SA1 | cds-NP_010219.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:338587-339170:+ | gene-YDL064W_ThermosaccDry | rna-NM_001180123.1_ThermosaccDry | cds-NP_010219.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:341157-341740:+ | gene-YDL064W_VR1 | rna-NM_001180123.1_VR1 | cds-NP_010219.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:336520-337103:+ | gene-YDL064W_ZTW1 | rna-NM_001180123.1_ZTW1 | cds-NP_010219.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:338650-339233:+ | gene-YDL064W_Sparadoxus | rna-NM_001180123.1_Sparadoxus | cds-NP_010219.1_Sparadoxus | 96.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |